Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917571
Identifier: 220917571
GI number: 220917571
Start: 2728162
End: 2728710
Strand: Reverse
Name: 220917571
Synonym: A2cp1_2471
Alternate gene names: NA
Gene position: 2728710-2728162 (Counterclockwise)
Preceding gene: 220917572
Following gene: 220917570
Centisome position: 54.26
GC content: 78.32
Gene sequence:
>549_bases ATGATCCGCACCCGATCCCCGCGGCGCGCGGCGCTCGCGCTCGCCCTGGCGCTCGGACCGCTCCTGCTGGGCGGCTGCGC CGGCCTCCGCGAGGCGCTCTCGCCCGCGCCGGAGGGCGTCCCCTCCGGCCGGCCCGGGTGGCTCGTGTACACGGTGGGTG CGCTGCGCTTCGAGGCGCCGGAGACGTGGCGGGCCTCCGGCTCGGCCCGCAAGCTGCGGCTCGAGGCGCCGGACGGGAAC GCCCGGCTGGACGTGTCCACGCCGGAGCAGCCGTTCGAGGGCGAGCAGGCCTGCCTGGCGGACGCCGAGGCGGTGCTGAA GCGCGGCGAGGCGATGGAGCGGGCCCGCCGGCACCCCACGCGCTTCGCCGGCGCCCGCGCGTTCTCGTTCGAGGGCGACT CCGCCGGCTGGCACGTGTGGGCGTGGGCGGCCTGCGACGGCGGCAGCCAGTACCAGGTCTTCTTCACCGCGCGCACCCCC GCCGGCGCGGAGGCGATCGACGCCTGGCGGACGCTGTCGAGCAGCGCGCGCATCGGGGGGCAGGCATGA
Upstream 100 bases:
>100_bases ACGTGGCGCGCGCCGAGGACGGCGGCAAGGGGCTGTCCGGCGTGGTGCCCCGCGATCCGGCGTACTTCAACCCGTTCCTC GAGATCCTGGAGGGCGCGCG
Downstream 100 bases:
>100_bases CGCTGCACGAGTGGGAGCCGGGGCAGGTGGTCCGCCCGTACGGCGACCGGCGCGACGACGGCGTGGTGCAGCTCTCGTTC GTGCTGCCGGTCCCGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MIRTRSPRRAALALALALGPLLLGGCAGLREALSPAPEGVPSGRPGWLVYTVGALRFEAPETWRASGSARKLRLEAPDGN ARLDVSTPEQPFEGEQACLADAEAVLKRGEAMERARRHPTRFAGARAFSFEGDSAGWHVWAWAACDGGSQYQVFFTARTP AGAEAIDAWRTLSSSARIGGQA
Sequences:
>Translated_182_residues MIRTRSPRRAALALALALGPLLLGGCAGLREALSPAPEGVPSGRPGWLVYTVGALRFEAPETWRASGSARKLRLEAPDGN ARLDVSTPEQPFEGEQACLADAEAVLKRGEAMERARRHPTRFAGARAFSFEGDSAGWHVWAWAACDGGSQYQVFFTARTP AGAEAIDAWRTLSSSARIGGQA >Mature_182_residues MIRTRSPRRAALALALALGPLLLGGCAGLREALSPAPEGVPSGRPGWLVYTVGALRFEAPETWRASGSARKLRLEAPDGN ARLDVSTPEQPFEGEQACLADAEAVLKRGEAMERARRHPTRFAGARAFSFEGDSAGWHVWAWAACDGGSQYQVFFTARTP AGAEAIDAWRTLSSSARIGGQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19376; Mature: 19376
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTRSPRRAALALALALGPLLLGGCAGLREALSPAPEGVPSGRPGWLVYTVGALRFEAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCC ETWRASGSARKLRLEAPDGNARLDVSTPEQPFEGEQACLADAEAVLKRGEAMERARRHPT CCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCC RFAGARAFSFEGDSAGWHVWAWAACDGGSQYQVFFTARTPAGAEAIDAWRTLSSSARIGG HHCCCEEEECCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC QA CC >Mature Secondary Structure MIRTRSPRRAALALALALGPLLLGGCAGLREALSPAPEGVPSGRPGWLVYTVGALRFEAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCC ETWRASGSARKLRLEAPDGNARLDVSTPEQPFEGEQACLADAEAVLKRGEAMERARRHPT CCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCC RFAGARAFSFEGDSAGWHVWAWAACDGGSQYQVFFTARTPAGAEAIDAWRTLSSSARIGG HHCCCEEEECCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC QA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA