Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917566
Identifier: 220917566
GI number: 220917566
Start: 2725262
End: 2725750
Strand: Reverse
Name: 220917566
Synonym: A2cp1_2466
Alternate gene names: NA
Gene position: 2725750-2725262 (Counterclockwise)
Preceding gene: 220917567
Following gene: 220917561
Centisome position: 54.2
GC content: 75.66
Gene sequence:
>489_bases ATGAGCAGCCTCTCCGACTGGCTGAAGGACTTCCGCGTGCTCCACGCGAAGGCGCGCGCCGGCACGCTCGCCGGGCGCGA GGCCGACGTCTACCGCGCCGGCCGCGACGAGCTGGCCCGCGCGCTGCTCGCGGCGCAGCGGCTCACCCTGAAGCCGGGCG AGCTGCCGCGGCAGGCGCTGCGCGTGGCCCGCGCGCTCCAGGTGGACCTGGACATGCTCACCTCCGCCGCGCGCGCGCTC ACCGTCGACGTGTCGAGCGGCGGGTTCGCCTGCCTGCTCGCGAAGGCGCCGCCGGCGGGCGACGAGGTGAAGGTGTCGAT GCGGCTCCCCGGCGGCGAGGCGCTCGCGTGCCGCGCGCGGGTCACCGACGTGAAGCCGCTGCAGGGGAACGTGCGCGCGT CGTTCCAGCTCGTCGGCCTCACCGCCGCCGAGCGCGAGCGCCTCGAGCTGATGGTGTTCGACACCGTGCTCGAGCAGCTG ACCGCCTGA
Upstream 100 bases:
>100_bases GCAACCCGCAGACGGGCGCCGAGATCCAGATCGCTCCCACCAAGACCGTCGGCTTCAAGCCCGCGCCCGAGCTGAAGAAG GCGCTGTAGGCGAGGCCCCC
Downstream 100 bases:
>100_bases TCCCGGCGCGGTGAAAGAGGCGAGGCGCCCCGGATCGCCCGGAGCGCCCCGCCCGGCGCGCACCCACGCGCGCCGCCCGC ACTACTTCTTCGCGAGCAGC
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type Iv Pilus Assembly Pilz
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSSLSDWLKDFRVLHAKARAGTLAGREADVYRAGRDELARALLAAQRLTLKPGELPRQALRVARALQVDLDMLTSAARAL TVDVSSGGFACLLAKAPPAGDEVKVSMRLPGGEALACRARVTDVKPLQGNVRASFQLVGLTAAERERLELMVFDTVLEQL TA
Sequences:
>Translated_162_residues MSSLSDWLKDFRVLHAKARAGTLAGREADVYRAGRDELARALLAAQRLTLKPGELPRQALRVARALQVDLDMLTSAARAL TVDVSSGGFACLLAKAPPAGDEVKVSMRLPGGEALACRARVTDVKPLQGNVRASFQLVGLTAAERERLELMVFDTVLEQL TA >Mature_161_residues SSLSDWLKDFRVLHAKARAGTLAGREADVYRAGRDELARALLAAQRLTLKPGELPRQALRVARALQVDLDMLTSAARALT VDVSSGGFACLLAKAPPAGDEVKVSMRLPGGEALACRARVTDVKPLQGNVRASFQLVGLTAAERERLELMVFDTVLEQLT A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17409; Mature: 17278
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSDWLKDFRVLHAKARAGTLAGREADVYRAGRDELARALLAAQRLTLKPGELPRQAL CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHH RVARALQVDLDMLTSAARALTVDVSSGGFACLLAKAPPAGDEVKVSMRLPGGEALACRAR HHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEE VTDVKPLQGNVRASFQLVGLTAAERERLELMVFDTVLEQLTA CCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSLSDWLKDFRVLHAKARAGTLAGREADVYRAGRDELARALLAAQRLTLKPGELPRQAL CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHH RVARALQVDLDMLTSAARALTVDVSSGGFACLLAKAPPAGDEVKVSMRLPGGEALACRAR HHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEE VTDVKPLQGNVRASFQLVGLTAAERERLELMVFDTVLEQLTA CCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA