Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is cmk [H]
Identifier: 220917539
GI number: 220917539
Start: 2698253
End: 2699008
Strand: Reverse
Name: cmk [H]
Synonym: A2cp1_2439
Alternate gene names: 220917539
Gene position: 2699008-2698253 (Counterclockwise)
Preceding gene: 220917541
Following gene: 220917538
Centisome position: 53.67
GC content: 77.51
Gene sequence:
>756_bases ATGCCCGTCCCCCAGGGCTCCTCGAGCCCCGCACCCGCGCACCGCCCCTTCATCGTCGCGATCGACGGGCCGGCCGGCGC GGGCAAGTCCACCGCCTCGCGGCAGCTCGCCGCGCGGCTCGGGTTCGCCATGGTGGACACCGGCGCCATCTACCGGACCG TGGCGCTCGCCGCGACGCTCCGCGGGATCGCGCTCGACGACGACGCCGGCCTGGGCCAGCTGCTCCCGCTGCTCGCCATC CGCTTCGCGCCCTCCGGGCAGCCCGGCGGCGGCCAGCGGGTCCTCCTCGGCGAGGAGGACGTGTCGGTGGAGATCCGCAC CCCGCCCATGTCGCTCGGGGCGAGCAAGGTGTCGGCGCGGCCGGTGGTGCGGGCCGGGCTGCTCGAGCTGCAGCGCCGGC TCGCGCTCGCCGCGGAGAACCGCGGGGCGGTGCTCGAGGGACGCGACATCGGCACGGTGGTGTTCCCGGACGCCGACGCC AAGTTCTTCCTGGTCGCGACGCCCGAGGAGCGGGCGCGGCGGCGCCACGCCGAGCTGCTGGCGAAGGGCGACGGCTCCAC CTTCGAGGAAGTGCTCGCCGACCAGCTGAAGCGCGACCGGCAGGACTCGGAGCGCGAGATCGCCCCCCTCCGTCCGGCGG AGGACGCGGTGGTGGTGGACACGAGCGGCACGCCGCTCGAGGCGGTGGTGGACGCGCTCGCCCGCGAGGTGCGCGCGCGC CAGCGCCGGCGCGGGCGCGCCGGGGGCCGGCCGTGA
Upstream 100 bases:
>100_bases ACCCCGGGATCGTGACGCCGGAGCCGGCCGGCGCCAGTCCGCGATGGGGGACCTCGGCGCGGTCGCGCCTCCCGGCGGAC AGGGGTATAACGGTTCGCCC
Downstream 100 bases:
>100_bases GCGAGGGCGAGCGCACCTACGGGCCGAAGGAGTGCGGGACCTGCCGGCTGTGGCGGCCCATCCTGGAGGACGCGCGCGGC CCCATCGGCCCGTGCCGCCT
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MPVPQGSSSPAPAHRPFIVAIDGPAGAGKSTASRQLAARLGFAMVDTGAIYRTVALAATLRGIALDDDAGLGQLLPLLAI RFAPSGQPGGGQRVLLGEEDVSVEIRTPPMSLGASKVSARPVVRAGLLELQRRLALAAENRGAVLEGRDIGTVVFPDADA KFFLVATPEERARRRHAELLAKGDGSTFEEVLADQLKRDRQDSEREIAPLRPAEDAVVVDTSGTPLEAVVDALAREVRAR QRRRGRAGGRP
Sequences:
>Translated_251_residues MPVPQGSSSPAPAHRPFIVAIDGPAGAGKSTASRQLAARLGFAMVDTGAIYRTVALAATLRGIALDDDAGLGQLLPLLAI RFAPSGQPGGGQRVLLGEEDVSVEIRTPPMSLGASKVSARPVVRAGLLELQRRLALAAENRGAVLEGRDIGTVVFPDADA KFFLVATPEERARRRHAELLAKGDGSTFEEVLADQLKRDRQDSEREIAPLRPAEDAVVVDTSGTPLEAVVDALAREVRAR QRRRGRAGGRP >Mature_250_residues PVPQGSSSPAPAHRPFIVAIDGPAGAGKSTASRQLAARLGFAMVDTGAIYRTVALAATLRGIALDDDAGLGQLLPLLAIR FAPSGQPGGGQRVLLGEEDVSVEIRTPPMSLGASKVSARPVVRAGLLELQRRLALAAENRGAVLEGRDIGTVVFPDADAK FFLVATPEERARRRHAELLAKGDGSTFEEVLADQLKRDRQDSEREIAPLRPAEDAVVVDTSGTPLEAVVDALAREVRARQ RRRGRAGGRP
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=214, Percent_Identity=43.4579439252336, Blast_Score=153, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 26513; Mature: 26381
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPQGSSSPAPAHRPFIVAIDGPAGAGKSTASRQLAARLGFAMVDTGAIYRTVALAATL CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHH RGIALDDDAGLGQLLPLLAIRFAPSGQPGGGQRVLLGEEDVSVEIRTPPMSLGASKVSAR HCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHCCC PVVRAGLLELQRRLALAAENRGAVLEGRDIGTVVFPDADAKFFLVATPEERARRRHAELL HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHH AKGDGSTFEEVLADQLKRDRQDSEREIAPLRPAEDAVVVDTSGTPLEAVVDALAREVRAR HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH QRRRGRAGGRP HHHCCCCCCCC >Mature Secondary Structure PVPQGSSSPAPAHRPFIVAIDGPAGAGKSTASRQLAARLGFAMVDTGAIYRTVALAATL CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHH RGIALDDDAGLGQLLPLLAIRFAPSGQPGGGQRVLLGEEDVSVEIRTPPMSLGASKVSAR HCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHCCC PVVRAGLLELQRRLALAAENRGAVLEGRDIGTVVFPDADAKFFLVATPEERARRRHAELL HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHH AKGDGSTFEEVLADQLKRDRQDSEREIAPLRPAEDAVVVDTSGTPLEAVVDALAREVRAR HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH QRRRGRAGGRP HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA