| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ygjT [C]
Identifier: 220917051
GI number: 220917051
Start: 2201892
End: 2202854
Strand: Direct
Name: ygjT [C]
Synonym: A2cp1_1947
Alternate gene names: 220917051
Gene position: 2201892-2202854 (Clockwise)
Preceding gene: 220917043
Following gene: 220917056
Centisome position: 43.78
GC content: 68.02
Gene sequence:
>963_bases ATGCACCCTCCCGCCCTCGCGCTCGAGACCGTCGGAAACCCCTGGCTCTGGCTCGGCTTCCTGGTCCTGGTGCTCGTCCT GCTGGCGCTCGACCTGGGCGTGTTCCACCGGCGCGACGAGGTGATCCGCGCGCGCGAGGCGCTGGGCTGGACCGCGGTGT GGGCGTCGCTGGCGGCGGCGTTCGCCGGGTTGGTGTGGTGGCGCTTCGGGGCGAACAAGGCCATCGAGTTCGTCACCGGC TACCTCATCGAGCAGTCGCTCTCGGTGGACAACCTGTTCGTCTTCGTGCTCGTGTTCGCGTCGTTCGCGATCCCGCCGAA GCTGCAGCACCGCGTGCTGTTCTGGGGCATCACCACCGCGTTCTTCCTGCGCCTGGTGATGATCGTGGGCGGCACCGCGC TGCTCTCGCGCTTCCACTGGCTCATCTACGTGTTCGGCGGCTTCCTGGTGGTGACCGGGATCCGCATCTTCTTCCACGAG GAGCAGGAGCATCACCCGGAGAAGAGCGTCGCGTTCCGCGTGCTGCGCCGGCTGGTCCCGTCCACCAGCCGCATGGAGGG GCACCACTTCTTCCTGGTGGAGAACGGGCGCCGGCTGGCGACGCCGCTGTTCCTGGCGCTGTGCATGATCGAGATCTCCG ACGTCGTGTTCGCGCTCGACTCGGTGCCGGCGATCTTCGGCATCACGCTCGACCCGTTCATCGTCTTCACCTCGAACATC TTCGCCATCATGGGCCTGCGCTCGCTCTACTTCGCGGTGGCGCAGCTGCTGCGCCGCTTCGAGTACCTGAAGGCCGGCCT CGCCCTGGTGCTCGTGTTCATCGGCCTGAAGATGGTCGCGTCGAGCTGGGTGCACGTGAACGCGTTCGCGTCGCTCGGGG TGGTGGTGACGCTGCTCGGCGGCGCGATGGCGTACTCGCTGTGGCGCACGCGCCGCGAGGCGACCGGATCGCCGGAGGCG TAG
Upstream 100 bases:
>100_bases AGAAGAGGTGATGGTAGTTCAGCCATTCCATGGAGAAAATCTAACCCGGATCCAGAATTCCCCGGCGCGAACCCGCCGGA AGGTCTAAAAAGGCCGCCTC
Downstream 100 bases:
>100_bases CGACGTCGCGGCGCCGGCGCGCCCTCACCGCGCCGGGGGCGCGTCGCGCAGCGTCCGGAACGTCACGGACCAGCGCTCGG CGGGCACCGGCGGGATGGCG
Product: Integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MHPPALALETVGNPWLWLGFLVLVLVLLALDLGVFHRRDEVIRAREALGWTAVWASLAAAFAGLVWWRFGANKAIEFVTG YLIEQSLSVDNLFVFVLVFASFAIPPKLQHRVLFWGITTAFFLRLVMIVGGTALLSRFHWLIYVFGGFLVVTGIRIFFHE EQEHHPEKSVAFRVLRRLVPSTSRMEGHHFFLVENGRRLATPLFLALCMIEISDVVFALDSVPAIFGITLDPFIVFTSNI FAIMGLRSLYFAVAQLLRRFEYLKAGLALVLVFIGLKMVASSWVHVNAFASLGVVVTLLGGAMAYSLWRTRREATGSPEA
Sequences:
>Translated_320_residues MHPPALALETVGNPWLWLGFLVLVLVLLALDLGVFHRRDEVIRAREALGWTAVWASLAAAFAGLVWWRFGANKAIEFVTG YLIEQSLSVDNLFVFVLVFASFAIPPKLQHRVLFWGITTAFFLRLVMIVGGTALLSRFHWLIYVFGGFLVVTGIRIFFHE EQEHHPEKSVAFRVLRRLVPSTSRMEGHHFFLVENGRRLATPLFLALCMIEISDVVFALDSVPAIFGITLDPFIVFTSNI FAIMGLRSLYFAVAQLLRRFEYLKAGLALVLVFIGLKMVASSWVHVNAFASLGVVVTLLGGAMAYSLWRTRREATGSPEA >Mature_320_residues MHPPALALETVGNPWLWLGFLVLVLVLLALDLGVFHRRDEVIRAREALGWTAVWASLAAAFAGLVWWRFGANKAIEFVTG YLIEQSLSVDNLFVFVLVFASFAIPPKLQHRVLFWGITTAFFLRLVMIVGGTALLSRFHWLIYVFGGFLVVTGIRIFFHE EQEHHPEKSVAFRVLRRLVPSTSRMEGHHFFLVENGRRLATPLFLALCMIEISDVVFALDSVPAIFGITLDPFIVFTSNI FAIMGLRSLYFAVAQLLRRFEYLKAGLALVLVFIGLKMVASSWVHVNAFASLGVVVTLLGGAMAYSLWRTRREATGSPEA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=315, Percent_Identity=42.8571428571429, Blast_Score=252, Evalue=3e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35867; Mature: 35867
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPALALETVGNPWLWLGFLVLVLVLLALDLGVFHRRDEVIRAREALGWTAVWASLAAA CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGLVWWRFGANKAIEFVTGYLIEQSLSVDNLFVFVLVFASFAIPPKLQHRVLFWGITTA HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FFLRLVMIVGGTALLSRFHWLIYVFGGFLVVTGIRIFFHEEQEHHPEKSVAFRVLRRLVP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCHHHHHHHHHHHHCC STSRMEGHHFFLVENGRRLATPLFLALCMIEISDVVFALDSVPAIFGITLDPFIVFTSNI CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHH FAIMGLRSLYFAVAQLLRRFEYLKAGLALVLVFIGLKMVASSWVHVNAFASLGVVVTLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GAMAYSLWRTRREATGSPEA HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHPPALALETVGNPWLWLGFLVLVLVLLALDLGVFHRRDEVIRAREALGWTAVWASLAAA CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGLVWWRFGANKAIEFVTGYLIEQSLSVDNLFVFVLVFASFAIPPKLQHRVLFWGITTA HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FFLRLVMIVGGTALLSRFHWLIYVFGGFLVVTGIRIFFHEEQEHHPEKSVAFRVLRRLVP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCHHHHHHHHHHHHCC STSRMEGHHFFLVENGRRLATPLFLALCMIEISDVVFALDSVPAIFGITLDPFIVFTSNI CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHH FAIMGLRSLYFAVAQLLRRFEYLKAGLALVLVFIGLKMVASSWVHVNAFASLGVVVTLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GAMAYSLWRTRREATGSPEA HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA