| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ygaY [H]
Identifier: 220916918
GI number: 220916918
Start: 2028551
End: 2029759
Strand: Direct
Name: ygaY [H]
Synonym: A2cp1_1814
Alternate gene names: 220916918
Gene position: 2028551-2029759 (Clockwise)
Preceding gene: 220916917
Following gene: 220916919
Centisome position: 40.33
GC content: 77.92
Gene sequence:
>1209_bases GTGTCCGCCGCCCCCTCCGTCCGGTTCATCGTGCTCGTGCTCGCCGTCGCGGCGGGCGCCAGCGTGGGCAACCTGTACCT GCTGCAGCCGCTCCTCCCCGAGGTGGCGCGCACGTTCTCCACCTCGCCGCGGGCGGTGGGGGTGGTCTCGATGCTGACGC AGGTCGGGTACGGCGCCGGCATGTTCCTGTTCGTGCCGCTCGGCGACGTGCTGGAGCGGCGCCGGCTCATGCTGGCGCTG CTCGGCGCGGTGGCGGTGGCGCTGGTCGCGGTGGCGGCGTCGCCGACGCTGCCGGTGCTGGCGGGCGCGTCGCTGGCGGT GGGGATGACCACGGTGGTGCCGCAGCTGGCGCTCCCGCTCGCCGCGCACGTCGCGCCGCCGGAGGAGCGCGGCCGCGCGG TGGGCGCGGTGATGGGCGGGCTGCTGGTGGGCATCCTGCTCGCGCGCACCGCGAGCGGCTTCCTGGGCGCGCACCTGGGC TGGCGCGCGGTGTACGTGGTGGCGGCGGCGCTCATGGTGGCGCTGGCGGCGGCGCTCCGGGCGCTGCTCCCGCGGAGCGA GCCGGACGCCTCCATGCCGTACCCGGAGCTGCTCCGGTCGATGCTCGACATCGCGCGCGAGGAGCCGGTGCTCCGGGAGG CGGCGGCGCTCGGCGCGCTCGGGTTCGCGGCGTTCAGCGTGTTCTGGAGCACGCTCGCGTTCCAGCTCGAGGCGCGGCAC GGGCTCGGGCCGGACGTGGCCGGGCTGTTCGGGGTGCTCGGGGCCGCGGGCGCGCTGGCGGCGCCGGTGCTGGGGCGGCT CGCCGACCGCACCCGCCCGCGCGCGAACGCCGGCATCTCCATCGTGGTGGCGCTGGCCGGATTCGCGGTGTTCGCCGCGA GCGGGAGCGTCCCCGCGCTGGTGGCGGGGGTGCTGCTCCTCGACGTGGGGGTGCAGGGCAACCACGTCTCCAACCTGGCG CGGGTGCACGGGCGCCGGCCGGAGGCGCGCAGCCGCATGAACACGATCTACATGGTGACCTACTTCGCCGGCGGCGCGCT CGGGACCGCGGTGGGCACCTGGGCCTGGACCGCCCGCGGCTGGGCGGGCGTGTGCGCGGCGGGCGCGGCGTTCCTCGCCG CCGCGCTGGCCCTCTGGGCGCTCGGGCTGCGGCGCGACCCGGCCCCGGCGCGCGACGGTTCCCGCGGCAACCCGGCCCGA GGGGATTAG
Upstream 100 bases:
>100_bases TCGGCGGGAGCGGAGCGCGGGATGCCGCGCCCCGCGGCTGACGGCCCGGGCCGACGGTTCCGCGAGCGCGGCGGCCGGAT CGGATCTAAAACGTCCGGCC
Downstream 100 bases:
>100_bases AATGCGCCCCGTGAGCCAGCCCATCCGCGTGTTCGTCACCGGCGGTACCTTCGACAAGGAGTACGACGAGCTGTCCGGTC GGCTCTACTTCAAGGACACG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSAAPSVRFIVLVLAVAAGASVGNLYLLQPLLPEVARTFSTSPRAVGVVSMLTQVGYGAGMFLFVPLGDVLERRRLMLAL LGAVAVALVAVAASPTLPVLAGASLAVGMTTVVPQLALPLAAHVAPPEERGRAVGAVMGGLLVGILLARTASGFLGAHLG WRAVYVVAAALMVALAAALRALLPRSEPDASMPYPELLRSMLDIAREEPVLREAAALGALGFAAFSVFWSTLAFQLEARH GLGPDVAGLFGVLGAAGALAAPVLGRLADRTRPRANAGISIVVALAGFAVFAASGSVPALVAGVLLLDVGVQGNHVSNLA RVHGRRPEARSRMNTIYMVTYFAGGALGTAVGTWAWTARGWAGVCAAGAAFLAAALALWALGLRRDPAPARDGSRGNPAR GD
Sequences:
>Translated_402_residues MSAAPSVRFIVLVLAVAAGASVGNLYLLQPLLPEVARTFSTSPRAVGVVSMLTQVGYGAGMFLFVPLGDVLERRRLMLAL LGAVAVALVAVAASPTLPVLAGASLAVGMTTVVPQLALPLAAHVAPPEERGRAVGAVMGGLLVGILLARTASGFLGAHLG WRAVYVVAAALMVALAAALRALLPRSEPDASMPYPELLRSMLDIAREEPVLREAAALGALGFAAFSVFWSTLAFQLEARH GLGPDVAGLFGVLGAAGALAAPVLGRLADRTRPRANAGISIVVALAGFAVFAASGSVPALVAGVLLLDVGVQGNHVSNLA RVHGRRPEARSRMNTIYMVTYFAGGALGTAVGTWAWTARGWAGVCAAGAAFLAAALALWALGLRRDPAPARDGSRGNPAR GD >Mature_401_residues SAAPSVRFIVLVLAVAAGASVGNLYLLQPLLPEVARTFSTSPRAVGVVSMLTQVGYGAGMFLFVPLGDVLERRRLMLALL GAVAVALVAVAASPTLPVLAGASLAVGMTTVVPQLALPLAAHVAPPEERGRAVGAVMGGLLVGILLARTASGFLGAHLGW RAVYVVAAALMVALAAALRALLPRSEPDASMPYPELLRSMLDIAREEPVLREAAALGALGFAAFSVFWSTLAFQLEARHG LGPDVAGLFGVLGAAGALAAPVLGRLADRTRPRANAGISIVVALAGFAVFAASGSVPALVAGVLLLDVGVQGNHVSNLAR VHGRRPEARSRMNTIYMVTYFAGGALGTAVGTWAWTARGWAGVCAAGAAFLAAALALWALGLRRDPAPARDGSRGNPARG D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40901; Mature: 40769
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAPSVRFIVLVLAVAAGASVGNLYLLQPLLPEVARTFSTSPRAVGVVSMLTQVGYGAG CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC MFLFVPLGDVLERRRLMLALLGAVAVALVAVAASPTLPVLAGASLAVGMTTVVPQLALPL CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHH AAHVAPPEERGRAVGAVMGGLLVGILLARTASGFLGAHLGWRAVYVVAAALMVALAAALR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLPRSEPDASMPYPELLRSMLDIAREEPVLREAAALGALGFAAFSVFWSTLAFQLEARH HHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLGPDVAGLFGVLGAAGALAAPVLGRLADRTRPRANAGISIVVALAGFAVFAASGSVPAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH VAGVLLLDVGVQGNHVSNLARVHGRRPEARSRMNTIYMVTYFAGGALGTAVGTWAWTARG HHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCC WAGVCAAGAAFLAAALALWALGLRRDPAPARDGSRGNPARGD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAAPSVRFIVLVLAVAAGASVGNLYLLQPLLPEVARTFSTSPRAVGVVSMLTQVGYGAG CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC MFLFVPLGDVLERRRLMLALLGAVAVALVAVAASPTLPVLAGASLAVGMTTVVPQLALPL CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHH AAHVAPPEERGRAVGAVMGGLLVGILLARTASGFLGAHLGWRAVYVVAAALMVALAAALR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLPRSEPDASMPYPELLRSMLDIAREEPVLREAAALGALGFAAFSVFWSTLAFQLEARH HHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLGPDVAGLFGVLGAAGALAAPVLGRLADRTRPRANAGISIVVALAGFAVFAASGSVPAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH VAGVLLLDVGVQGNHVSNLARVHGRRPEARSRMNTIYMVTYFAGGALGTAVGTWAWTARG HHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCC WAGVCAAGAAFLAAALALWALGLRRDPAPARDGSRGNPARGD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]