Click here to switch to the map view.

The map label for this gene is ybiK [C]

Identifier: 220916699

GI number: 220916699

Start: 1780693

End: 1781595

Strand: Reverse

Name: ybiK [C]

Synonym: A2cp1_1593

Alternate gene names: 220916699

Gene position: 1781595-1780693 (Counterclockwise)

Preceding gene: 220916708

Following gene: 220916694

Centisome position: 35.42

GC content: 79.4

Gene sequence:

>903_bases
ATGACGCCATCACCCACGGTCACACCGGTCCTCGTGGTCCACGGCGGCGCGGGGCAGCCCAGCCCCGACCGCGGGACCGA
CGCGCCGCGGCTCGAGGGGCTCCGCCGCGCCTGCGCGGCCGGCTGGCAGATCCTCTCCCGGGGCGGCGCCGCGCTCGACG
CGGTGGAGGCCGCGGTGCGGGTGCTGGAGGACGACCCGCTGTTCAACGCGGGCCGGGGCGCCGCGCTCACCGCCGACGGG
ACGGTCGAGCTCGACGCCTCGATCATGGACGGCGCCACGCTCCGCTGCGGGGCGGTGGCGGCGGTGCGCGACGTGGCGAA
CCCGGTCTCGCTCGCCCGGGCGGTGATGGAGCGCTCGCCGCACGTGCTGCTCGCCGGCGAGGGCGCGTCGTCGTTCGCCC
GCGAGGTGGGCATCCCGCCCTGCGACCCCGCGGCGCTCGTCACGCCCGCGCAGCGGGTCCGCTTCGAGGCGGAGCGCGAC
GCGGCGCGGTCGAGGCCGGGGCACGGCACGGTCGGCGCCGCCGCGCGCGACGCGCGGGGCCACCTCGCCGCCGCCACGTC
CACCGGCGGGATGATGCTGAAGCGCGCCGGCCGCGTGGGCGACACGCCCATCATCGGGGCCGGCACCTACGCGGACGACG
CCTCGGCGGCGGTCTCCTGCACCGGCCACGGCGAGCGCGTCATCCAGGTGACCCTGGCGCGGTACGCGGCCGACCGGGTG
GCCGCGGGCGCCACGCCGGCGGAGGCGGCCCGCGAGGCGGTGCGGATGCTCGCCGCGCGCGTGCAGGGCGAGGGCGGCCT
GATCCTGGTCGGCCCGGCGGGCGACCCGGGGTTCGCGTTCTGCACCGAGGCCATGAGCCGGGCCTGGATCGGGCGGGATG
GGGTGGTGCACGCCGCCCTGTAG

Upstream 100 bases:

>100_bases
TCTGCGTGTCGGGCAGCGCGCCCCGGGGCGCGTCCGCGCGCCTCCCCCGCGCCGCGCGCCGCCTTGCCCCCGCGGCGGGC
CCGCCGCTACGCTCCAGCCC

Downstream 100 bases:

>100_bases
CCGCGCGGGCCCGGAGCTCACCCGCGGGTGATGCGCCCGGAGCCGGCCACGGCGGCCTGCTCCACCCGGCCCTCGCCCCA
CCAGCGCACGTCGCCGGAGC

Product: Asparaginase

Products: NA

Alternate protein names: L-asparagine amidohydrolase [H]

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTPSPTVTPVLVVHGGAGQPSPDRGTDAPRLEGLRRACAAGWQILSRGGAALDAVEAAVRVLEDDPLFNAGRGAALTADG
TVELDASIMDGATLRCGAVAAVRDVANPVSLARAVMERSPHVLLAGEGASSFAREVGIPPCDPAALVTPAQRVRFEAERD
AARSRPGHGTVGAAARDARGHLAAATSTGGMMLKRAGRVGDTPIIGAGTYADDASAAVSCTGHGERVIQVTLARYAADRV
AAGATPAEAAREAVRMLAARVQGEGGLILVGPAGDPGFAFCTEAMSRAWIGRDGVVHAAL

Sequences:

>Translated_300_residues
MTPSPTVTPVLVVHGGAGQPSPDRGTDAPRLEGLRRACAAGWQILSRGGAALDAVEAAVRVLEDDPLFNAGRGAALTADG
TVELDASIMDGATLRCGAVAAVRDVANPVSLARAVMERSPHVLLAGEGASSFAREVGIPPCDPAALVTPAQRVRFEAERD
AARSRPGHGTVGAAARDARGHLAAATSTGGMMLKRAGRVGDTPIIGAGTYADDASAAVSCTGHGERVIQVTLARYAADRV
AAGATPAEAAREAVRMLAARVQGEGGLILVGPAGDPGFAFCTEAMSRAWIGRDGVVHAAL
>Mature_299_residues
TPSPTVTPVLVVHGGAGQPSPDRGTDAPRLEGLRRACAAGWQILSRGGAALDAVEAAVRVLEDDPLFNAGRGAALTADGT
VELDASIMDGATLRCGAVAAVRDVANPVSLARAVMERSPHVLLAGEGASSFAREVGIPPCDPAALVTPAQRVRFEAERDA
ARSRPGHGTVGAAARDARGHLAAATSTGGMMLKRAGRVGDTPIIGAGTYADDASAAVSCTGHGERVIQVTLARYAADRVA
AGATPAEAAREAVRMLAARVQGEGGLILVGPAGDPGFAFCTEAMSRAWIGRDGVVHAAL

Specific function: Unknown

COG id: COG1446

COG function: function code E; Asparaginase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ntn-hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI145275202, Length=300, Percent_Identity=45.6666666666667, Blast_Score=236, Evalue=1e-62,
Organism=Homo sapiens, GI145275200, Length=300, Percent_Identity=45.6666666666667, Blast_Score=236, Evalue=1e-62,
Organism=Homo sapiens, GI98991769, Length=284, Percent_Identity=35.9154929577465, Blast_Score=134, Evalue=8e-32,
Organism=Homo sapiens, GI285002251, Length=268, Percent_Identity=32.4626865671642, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI285002253, Length=268, Percent_Identity=30.5970149253731, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI1787050, Length=296, Percent_Identity=45.6081081081081, Blast_Score=203, Evalue=9e-54,
Organism=Caenorhabditis elegans, GI32564649, Length=286, Percent_Identity=30.0699300699301, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI18921183, Length=318, Percent_Identity=38.9937106918239, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI21357893, Length=260, Percent_Identity=36.1538461538462, Blast_Score=134, Evalue=6e-32,
Organism=Drosophila melanogaster, GI221330102, Length=284, Percent_Identity=32.0422535211268, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24652135, Length=286, Percent_Identity=32.1678321678322, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24655553, Length=226, Percent_Identity=30.0884955752212, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000246 [H]

Pfam domain/function: PF01112 Asparaginase_2 [H]

EC number: =3.5.1.1 [H]

Molecular weight: Translated: 30290; Mature: 30158

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSPTVTPVLVVHGGAGQPSPDRGTDAPRLEGLRRACAAGWQILSRGGAALDAVEAAVR
CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLEDDPLFNAGRGAALTADGTVELDASIMDGATLRCGAVAAVRDVANPVSLARAVMERSP
HHCCCCCCCCCCCCEEECCCCEEECCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCC
HVLLAGEGASSFAREVGIPPCDPAALVTPAQRVRFEAERDAARSRPGHGTVGAAARDARG
CEEEECCCHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HLAAATSTGGMMLKRAGRVGDTPIIGAGTYADDASAAVSCTGHGERVIQVTLARYAADRV
CEEEECCCCCHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHH
AAGATPAEAAREAVRMLAARVQGEGGLILVGPAGDPGFAFCTEAMSRAWIGRDGVVHAAL
HCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure 
TPSPTVTPVLVVHGGAGQPSPDRGTDAPRLEGLRRACAAGWQILSRGGAALDAVEAAVR
CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLEDDPLFNAGRGAALTADGTVELDASIMDGATLRCGAVAAVRDVANPVSLARAVMERSP
HHCCCCCCCCCCCCEEECCCCEEECCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCC
HVLLAGEGASSFAREVGIPPCDPAALVTPAQRVRFEAERDAARSRPGHGTVGAAARDARG
CEEEECCCHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HLAAATSTGGMMLKRAGRVGDTPIIGAGTYADDASAAVSCTGHGERVIQVTLARYAADRV
CEEEECCCCCHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHH
AAGATPAEAAREAVRMLAARVQGEGGLILVGPAGDPGFAFCTEAMSRAWIGRDGVVHAAL
HCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA