Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916626
Identifier: 220916626
GI number: 220916626
Start: 1700295
End: 1701668
Strand: Reverse
Name: 220916626
Synonym: A2cp1_1520
Alternate gene names: NA
Gene position: 1701668-1700295 (Counterclockwise)
Preceding gene: 220916627
Following gene: 220916622
Centisome position: 33.83
GC content: 77.51
Gene sequence:
>1374_bases GTGCGGCGTCCGGGCGAGATCCTCCTCGTCTCCACGTACGAGCTCGGTCACCAGCCGCACGGGCTGGCGCTACCCCGCGC GTTCCTGGAGCGCGCCGGGTTCGCGCCCGCCTGCCTCGATCTCGCGGTCGAGCCGCTCGATCCGGCCCGGGTGGCCGCCG CGCGCCTGGTCGCGCTCTCCGTCCCCATGCACACCGCGCTGCGCCTCGGGCTCGAGGCGGCGGCGCGCGTGCGGGCGCTC AACCCTGCCGCCGCGATCGCGTTCCACGGCCTGTACGCGCCGCTCCACGCGGAGCTGCTGCTCGCGGCCGGCGCCATCGC GGTCCTCGGCGGCGAGTGCGAGGAGGAGCTCGTCGCGCTCGCGGCCGCGCTCGAGCGCGGAGCGGACCTCGCCCGCTTCG TCCAGCGCGGCGGGGACGCGGCGCCGCGGGCCCGGCTCGACTTCCCGGTCCCGAGCCGCGCCGGGCTCCCGGCGCTGTCG CGCTACGCGCGCCTCGCCGCCGCCGACGGGACGCTCCAGGTGGCCGGCTACGCCGAGGCGACCCGCGGGTGCAAGCACCT CTGCCGCCACTGCCCCATCCCGCCGGTCTACCGCGGCCGCTTCGTGGCGGTGCCGCTCGAGACGGTGGTCGAGGACGTGA CGCGGCAGGTGGCGCTCGGGGCCGCGCACGTCACGTTCGGCGACCCCGACTTCCTGAACGGCCCGACGCACGCGCTCCGC GTCGCGCGCGCGGTGCACGCGCGCTTCTCCGCGCTCACCTTCGACTTCACCGCCAAGGTCTCGCACCTGGTGGAGCACGC GGACGCGGTGGCGGAGCTGGCGCGGCTCGGCGCGGTGTTCGTCACCTCCGCGGTCGAGTCGCTCTCGGAGCGCGTGCTGG CGGCGCTCGACAAGGGTCACGACCGCGCCGCCGCGCTGGCCGCGTTCCGCGCCTGCGCCGCGGCCGGCGTGCCCCTCCGC CCGACGCTGGTGCCGTTCACGCCCTGGGGCACGCTCGACGACCTGGTGGACCTGCTCGACGTGCTCGAGGCGGAGGGGAT GCTCCCGAACCTCGATCCGGTGCAGCTCTCCATCCGCCTGCTGATCCCGCCCGGCTCGCTGCTCGAGCGCGCGCCCGGGA TCGCGTTCGAGGGGCTCGACGCGGCCGCGCTCACCTGGCGCTGGCGCCACCCGGATCCGCGGATGGACGCGCTGCAGCCG CGGATCGCCGCCGAGGTCGAGGCCGGCGCCGCGCGCGAGGCGCCGCCGCTCGAGACCATCGCGCGCGTCCGCGCGCTGGT GCTCGCCGCGGCCGGGCTGCCGCACCGGCACGTCCGCGTGCTCGCCCCCGACCAGCGGCGCGTGCCCCGCCTCACCGAGA GCTGGTTCTGTTGA
Upstream 100 bases:
>100_bases CTTCGGCGAGAACGCGCAGCTCCCGCCCGACTACCGGCCGCCGCCGTCCAAGGGCTAGCCGTCCCGCCGGCGCGGCGGGC GAGGTGACGCGGGAGCGCAC
Downstream 100 bases:
>100_bases GCAGAGCCGACGGCCCGTCAGGTCGACGGGCTCTCCGAGGACCCCCGGCGCTGACGCGCGGCCCGCGCCGTCAGCGGAGG CCGCGCGCCGCCCAGGCGCG
Product: Radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MRRPGEILLVSTYELGHQPHGLALPRAFLERAGFAPACLDLAVEPLDPARVAAARLVALSVPMHTALRLGLEAAARVRAL NPAAAIAFHGLYAPLHAELLLAAGAIAVLGGECEEELVALAAALERGADLARFVQRGGDAAPRARLDFPVPSRAGLPALS RYARLAAADGTLQVAGYAEATRGCKHLCRHCPIPPVYRGRFVAVPLETVVEDVTRQVALGAAHVTFGDPDFLNGPTHALR VARAVHARFSALTFDFTAKVSHLVEHADAVAELARLGAVFVTSAVESLSERVLAALDKGHDRAAALAAFRACAAAGVPLR PTLVPFTPWGTLDDLVDLLDVLEAEGMLPNLDPVQLSIRLLIPPGSLLERAPGIAFEGLDAAALTWRWRHPDPRMDALQP RIAAEVEAGAAREAPPLETIARVRALVLAAAGLPHRHVRVLAPDQRRVPRLTESWFC
Sequences:
>Translated_457_residues MRRPGEILLVSTYELGHQPHGLALPRAFLERAGFAPACLDLAVEPLDPARVAAARLVALSVPMHTALRLGLEAAARVRAL NPAAAIAFHGLYAPLHAELLLAAGAIAVLGGECEEELVALAAALERGADLARFVQRGGDAAPRARLDFPVPSRAGLPALS RYARLAAADGTLQVAGYAEATRGCKHLCRHCPIPPVYRGRFVAVPLETVVEDVTRQVALGAAHVTFGDPDFLNGPTHALR VARAVHARFSALTFDFTAKVSHLVEHADAVAELARLGAVFVTSAVESLSERVLAALDKGHDRAAALAAFRACAAAGVPLR PTLVPFTPWGTLDDLVDLLDVLEAEGMLPNLDPVQLSIRLLIPPGSLLERAPGIAFEGLDAAALTWRWRHPDPRMDALQP RIAAEVEAGAAREAPPLETIARVRALVLAAAGLPHRHVRVLAPDQRRVPRLTESWFC >Mature_457_residues MRRPGEILLVSTYELGHQPHGLALPRAFLERAGFAPACLDLAVEPLDPARVAAARLVALSVPMHTALRLGLEAAARVRAL NPAAAIAFHGLYAPLHAELLLAAGAIAVLGGECEEELVALAAALERGADLARFVQRGGDAAPRARLDFPVPSRAGLPALS RYARLAAADGTLQVAGYAEATRGCKHLCRHCPIPPVYRGRFVAVPLETVVEDVTRQVALGAAHVTFGDPDFLNGPTHALR VARAVHARFSALTFDFTAKVSHLVEHADAVAELARLGAVFVTSAVESLSERVLAALDKGHDRAAALAAFRACAAAGVPLR PTLVPFTPWGTLDDLVDLLDVLEAEGMLPNLDPVQLSIRLLIPPGSLLERAPGIAFEGLDAAALTWRWRHPDPRMDALQP RIAAEVEAGAAREAPPLETIARVRALVLAAAGLPHRHVRVLAPDQRRVPRLTESWFC
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48611; Mature: 48611
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPGEILLVSTYELGHQPHGLALPRAFLERAGFAPACLDLAVEPLDPARVAAARLVALS CCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHH VPMHTALRLGLEAAARVRALNPAAAIAFHGLYAPLHAELLLAAGAIAVLGGECEEELVAL CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAALERGADLARFVQRGGDAAPRARLDFPVPSRAGLPALSRYARLAAADGTLQVAGYAEA HHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHH TRGCKHLCRHCPIPPVYRGRFVAVPLETVVEDVTRQVALGAAHVTFGDPDFLNGPTHALR HHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHH VARAVHARFSALTFDFTAKVSHLVEHADAVAELARLGAVFVTSAVESLSERVLAALDKGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DRAAALAAFRACAAAGVPLRPTLVPFTPWGTLDDLVDLLDVLEAEGMLPNLDPVQLSIRL HHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE LIPPGSLLERAPGIAFEGLDAAALTWRWRHPDPRMDALQPRIAAEVEAGAAREAPPLETI EECCHHHHHHCCCCEECCCCCEEEEEEECCCCCCHHHHCCHHHHHHCCCCCCCCCCHHHH ARVRALVLAAAGLPHRHVRVLAPDQRRVPRLTESWFC HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCC >Mature Secondary Structure MRRPGEILLVSTYELGHQPHGLALPRAFLERAGFAPACLDLAVEPLDPARVAAARLVALS CCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHH VPMHTALRLGLEAAARVRALNPAAAIAFHGLYAPLHAELLLAAGAIAVLGGECEEELVAL CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAALERGADLARFVQRGGDAAPRARLDFPVPSRAGLPALSRYARLAAADGTLQVAGYAEA HHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHH TRGCKHLCRHCPIPPVYRGRFVAVPLETVVEDVTRQVALGAAHVTFGDPDFLNGPTHALR HHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHH VARAVHARFSALTFDFTAKVSHLVEHADAVAELARLGAVFVTSAVESLSERVLAALDKGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DRAAALAAFRACAAAGVPLRPTLVPFTPWGTLDDLVDLLDVLEAEGMLPNLDPVQLSIRL HHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE LIPPGSLLERAPGIAFEGLDAAALTWRWRHPDPRMDALQPRIAAEVEAGAAREAPPLETI EECCHHHHHHCCCCEECCCCCEEEEEEECCCCCCHHHHCCHHHHHHCCCCCCCCCCHHHH ARVRALVLAAAGLPHRHVRVLAPDQRRVPRLTESWFC HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA