Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916551
Identifier: 220916551
GI number: 220916551
Start: 1619250
End: 1620038
Strand: Reverse
Name: 220916551
Synonym: A2cp1_1445
Alternate gene names: NA
Gene position: 1620038-1619250 (Counterclockwise)
Preceding gene: 220916552
Following gene: 220916546
Centisome position: 32.21
GC content: 77.19
Gene sequence:
>789_bases ATGACCTCCGCCGCGCTGCTCGTGCTCGCCCTGCTCGCCCCATCCGCCGCTCCGGCCGCCCCGGCCTGCGGCCCGCCGCC GCTCGCCGCCGGCGCCCGCCCCTGGGGCCCCGGCGAGACGCTCACCTTCGATCTCGACCTGCTCGGCATGGTGCGCACCG GCACGCTCCAGCTCTCGGTGGAGCGCCCCATGTCCCGCGGGCGCGTCATCCCGCTGCGCGCCCGCGCGCGCACCGACGCC TCCCTCGCCGCGCTCAAGAACGTCACCGCGGTGGGGTTCTCCTGGATCGACGCGGACACGCTCCTGCCCGAGCGGTACCG CGACGAGGCGCTGGAGAACGGCGTCCGCAAGGTGAGCGACACCCGGCTCGCGCCGCCGGCCGGCGAGGTGGTGGTCGCAT ACCGCTACGGCGACCGCGAGGGGAAGACGTCGTACCCGCGCCAGGGCCCGGTGCTGGACGCGCTCTCGGCGGTCTACCTG CTGCGCGCCGCGCGCCTCGCGCCAGGGGAGGCGTTCTGCTTCGAGCTGGTGGCGAACCGGCGCTTCTGGCGGCTGGAGGG GACGGTCGCGCGGAAGATCGAGCCGGTGGACACGCCCGCCGGCCGGTTCCAGACGCTGCGCGTGGACGCGGTGGCGCGCC GCGCCGACGACCCGGCGGCGCGGGCGCGCCCGCTGCACCTGTGGTTCTCGAACGACGGGCGCCGCCTGCTGGTCGCGGCG GTGAGCGAGATCGACCTGGGGCCGGTGCGCGCGATGCTGGCGAGCGTGCGCGGCGCGCGCGCGCCCTGA
Upstream 100 bases:
>100_bases GACCCGGCCCGCTGGCTCGCGGCGCGCCGGCGGCTGGGGGACGCGCTCGCCCGGCGGCTGGCGGCGCGCTGAGCGCCCGG GCGCGGCCGGGGCGCCGCAG
Downstream 100 bases:
>100_bases GAGCACGTGAACCCATCCCCTCCCGTCGCCGCGGCGGCCGATCCGCGTCGCATCGCGTCGTTGCTCCTCCCTCACATGCC TCGGGGCATGCTCGGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTSAALLVLALLAPSAAPAAPACGPPPLAAGARPWGPGETLTFDLDLLGMVRTGTLQLSVERPMSRGRVIPLRARARTDA SLAALKNVTAVGFSWIDADTLLPERYRDEALENGVRKVSDTRLAPPAGEVVVAYRYGDREGKTSYPRQGPVLDALSAVYL LRAARLAPGEAFCFELVANRRFWRLEGTVARKIEPVDTPAGRFQTLRVDAVARRADDPAARARPLHLWFSNDGRRLLVAA VSEIDLGPVRAMLASVRGARAP
Sequences:
>Translated_262_residues MTSAALLVLALLAPSAAPAAPACGPPPLAAGARPWGPGETLTFDLDLLGMVRTGTLQLSVERPMSRGRVIPLRARARTDA SLAALKNVTAVGFSWIDADTLLPERYRDEALENGVRKVSDTRLAPPAGEVVVAYRYGDREGKTSYPRQGPVLDALSAVYL LRAARLAPGEAFCFELVANRRFWRLEGTVARKIEPVDTPAGRFQTLRVDAVARRADDPAARARPLHLWFSNDGRRLLVAA VSEIDLGPVRAMLASVRGARAP >Mature_261_residues TSAALLVLALLAPSAAPAAPACGPPPLAAGARPWGPGETLTFDLDLLGMVRTGTLQLSVERPMSRGRVIPLRARARTDAS LAALKNVTAVGFSWIDADTLLPERYRDEALENGVRKVSDTRLAPPAGEVVVAYRYGDREGKTSYPRQGPVLDALSAVYLL RAARLAPGEAFCFELVANRRFWRLEGTVARKIEPVDTPAGRFQTLRVDAVARRADDPAARARPLHLWFSNDGRRLLVAAV SEIDLGPVRAMLASVRGARAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28180; Mature: 28049
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAALLVLALLAPSAAPAAPACGPPPLAAGARPWGPGETLTFDLDLLGMVRTGTLQLSV CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHEEEEEEECEEEEEE ERPMSRGRVIPLRARARTDASLAALKNVTAVGFSWIDADTLLPERYRDEALENGVRKVSD CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEECHHHCCHHHHHHHHHHHHHHHHHC TRLAPPAGEVVVAYRYGDREGKTSYPRQGPVLDALSAVYLLRAARLAPGEAFCFELVANR CCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC RFWRLEGTVARKIEPVDTPAGRFQTLRVDAVARRADDPAARARPLHLWFSNDGRRLLVAA EEEEECCHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCHHCCCEEEEEECCCCCEEEEEE VSEIDLGPVRAMLASVRGARAP HHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TSAALLVLALLAPSAAPAAPACGPPPLAAGARPWGPGETLTFDLDLLGMVRTGTLQLSV CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHEEEEEEECEEEEEE ERPMSRGRVIPLRARARTDASLAALKNVTAVGFSWIDADTLLPERYRDEALENGVRKVSD CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEECHHHCCHHHHHHHHHHHHHHHHHC TRLAPPAGEVVVAYRYGDREGKTSYPRQGPVLDALSAVYLLRAARLAPGEAFCFELVANR CCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC RFWRLEGTVARKIEPVDTPAGRFQTLRVDAVARRADDPAARARPLHLWFSNDGRRLLVAA EEEEECCHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCHHCCCEEEEEECCCCCEEEEEE VSEIDLGPVRAMLASVRGARAP HHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA