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The map label for this gene is ydjX [C]

Identifier: 220916536

GI number: 220916536

Start: 1602671

End: 1603459

Strand: Reverse

Name: ydjX [C]

Synonym: A2cp1_1430

Alternate gene names: 220916536

Gene position: 1603459-1602671 (Counterclockwise)

Preceding gene: 220916537

Following gene: 220916533

Centisome position: 31.88

GC content: 82.13

Gene sequence:

>789_bases
GTGACCCGCGGGCGGCGCGGCCGGGCGGATGGGACCGAGGGGCGCTACACTGCGCGCGTGCTCCCCTCCTCCCCTCCGCC
GGGCCGGCTGGCCCGGCTCGCCCGGCCCGCCGCCGCCCTGCTGGTCGTCGCGGTCGCGGCCGCGCTCGCCGCGCTCGCCC
CGGGCCCCGCCACCCGCGCGCTCGAGGCGCTGCGGCAGAGCGCGCCCGCCGCCGCCGCCGCGCTGGCGGCGGCCTACGTC
GCGAGCGGCCCGCTCCTCGTGCCCGCTCCGCTGCTGCACCTCGCCGCCGGGTTCGCGCTCGGGCCGGTGACCGGCTCGCT
CCTCGCCATCCCGGCCAGCACCGCCGGCGCCTGCGCCGCGTTCGGCGCCGGCCGCTGGCTGGTGCGGGAGCGCGCCGCCC
GGCTGGCCGCGCGCTCCCCCGCCCTCGCGGGCCTCGACGCCGCGCTGGGCGCCTCCGGCTTCCGCGTGGTGCTGCTGCTG
CGGCTCGCGCCGTTCGCGCCGTTCACCGTCCTCAACTACCTGCTCGGCGCGACGCCGGTGCCGCTCCGCGCCTTCGCGCT
CGCGTCGCTGCTCGGGAGCCTCCCGGGCCTCGTCGTCTCGGTGTACGTCGGGTCGCTCGCCGCGGACGTCACCGCGCTCC
GCGCCACGCTGGCGGCCGGCCGCGGCGGCGCCGGCGCGCTGATCCTGCCGGCGCTCGGGACGGGCGCCGTCCTTCTCGCC
ATCGCCTGGGTCCTTCGGCGATCGCTCGCCGCCGCGTCGGCCGCCCGCCCCACGCCCCCTCCGCGCTGA

Upstream 100 bases:

>100_bases
TCGCCGACGAGCACGGCGACCCCGAGACGGTGGACCTGCTCACCGGCGTCATCGCCGGCGTGGAGAAGCACGGCTGGTTC
CTGCGCGCCACCCTCGGCGA

Downstream 100 bases:

>100_bases
GAGCACGTGCCCCCCCTCCCGTCGCCGCGGCGGCCGATCCGCGTCGCATCGCGTCGTTGCTCCTCCCTCACATGCCTCGG
GGCATGCTCGGTCGTCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTRGRRGRADGTEGRYTARVLPSSPPPGRLARLARPAAALLVVAVAAALAALAPGPATRALEALRQSAPAAAAALAAAYV
ASGPLLVPAPLLHLAAGFALGPVTGSLLAIPASTAGACAAFGAGRWLVRERAARLAARSPALAGLDAALGASGFRVVLLL
RLAPFAPFTVLNYLLGATPVPLRAFALASLLGSLPGLVVSVYVGSLAADVTALRATLAAGRGGAGALILPALGTGAVLLA
IAWVLRRSLAAASAARPTPPPR

Sequences:

>Translated_262_residues
MTRGRRGRADGTEGRYTARVLPSSPPPGRLARLARPAAALLVVAVAAALAALAPGPATRALEALRQSAPAAAAALAAAYV
ASGPLLVPAPLLHLAAGFALGPVTGSLLAIPASTAGACAAFGAGRWLVRERAARLAARSPALAGLDAALGASGFRVVLLL
RLAPFAPFTVLNYLLGATPVPLRAFALASLLGSLPGLVVSVYVGSLAADVTALRATLAAGRGGAGALILPALGTGAVLLA
IAWVLRRSLAAASAARPTPPPR
>Mature_261_residues
TRGRRGRADGTEGRYTARVLPSSPPPGRLARLARPAAALLVVAVAAALAALAPGPATRALEALRQSAPAAAAALAAAYVA
SGPLLVPAPLLHLAAGFALGPVTGSLLAIPASTAGACAAFGAGRWLVRERAARLAARSPALAGLDAALGASGFRVVLLLR
LAPFAPFTVLNYLLGATPVPLRAFALASLLGSLPGLVVSVYVGSLAADVTALRATLAAGRGGAGALILPALGTGAVLLAI
AWVLRRSLAAASAARPTPPPR

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=197, Percent_Identity=28.4263959390863, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25828; Mature: 25697

Theoretical pI: Translated: 12.54; Mature: 12.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGRRGRADGTEGRYTARVLPSSPPPGRLARLARPAAALLVVAVAAALAALAPGPATRA
CCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LEALRQSAPAAAAALAAAYVASGPLLVPAPLLHLAAGFALGPVTGSLLAIPASTAGACAA
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
FGAGRWLVRERAARLAARSPALAGLDAALGASGFRVVLLLRLAPFAPFTVLNYLLGATPV
HHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PLRAFALASLLGSLPGLVVSVYVGSLAADVTALRATLAAGRGGAGALILPALGTGAVLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH
IAWVLRRSLAAASAARPTPPPR
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRGRRGRADGTEGRYTARVLPSSPPPGRLARLARPAAALLVVAVAAALAALAPGPATRA
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LEALRQSAPAAAAALAAAYVASGPLLVPAPLLHLAAGFALGPVTGSLLAIPASTAGACAA
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
FGAGRWLVRERAARLAARSPALAGLDAALGASGFRVVLLLRLAPFAPFTVLNYLLGATPV
HHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PLRAFALASLLGSLPGLVVSVYVGSLAADVTALRATLAAGRGGAGALILPALGTGAVLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH
IAWVLRRSLAAASAARPTPPPR
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]