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The map label for this gene is pdtaR [H]

Identifier: 220916353

GI number: 220916353

Start: 1397669

End: 1398058

Strand: Reverse

Name: pdtaR [H]

Synonym: A2cp1_1247

Alternate gene names: 220916353

Gene position: 1398058-1397669 (Counterclockwise)

Preceding gene: 220916354

Following gene: 220916352

Centisome position: 27.8

GC content: 76.92

Gene sequence:

>390_bases
GTGCTATCCTCCGCGCTCCAGGTGCGGCGCGTGAAGGTCCTCATCGCAGACGACGACCGGCTGGTCCGGACCATGGTCGC
CGACCTGCTCGCCGAGCTCGGCCACGAGGTGGTCGCGGCCGGGAGCGGGCCGGAGGCGGTGGAGCTGGCGGCCCGCGAGG
CGCCCGACCTGCTCGTCCTCGACTTCCTCATGCCGCGGCTCTCCGGGCTGGACGCGCTCCGCGCCATCCGCGAGGCCGGC
TCGCGCGCCCCGGCCGTCCTCCTGACCGCCATCAGCGGCCGCAGCGTCCGCGGGGTGGAGGGCGCCGACGCCGCCGAGGT
GGTGCTGGAGAAGCCGGTGACGCGCAAGGCGCTGGCGCGCGCGCTCGAGCGGGCGGTGCGGGCGCGATGA

Upstream 100 bases:

>100_bases
TGGAAGCGCGAGGTGTACGAGGACGGGTCGGAGTGGGTGGGCCTGGGCCCGTGACGCGCGCGCCGGGCGCCCGCCCGCGC
CCCGGCGGCGCCGGGGCGGC

Downstream 100 bases:

>100_bases
GGGTGTTCCGGACGCTGTTCCTCTCGATGCTGGCGGCGAGCGCGCTGCCCACCGCGGTCCTGGCGGTGGTCCTGGTGCAG
GACCGGGGCGGGCTGGGCGC

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MLSSALQVRRVKVLIADDDRLVRTMVADLLAELGHEVVAAGSGPEAVELAAREAPDLLVLDFLMPRLSGLDALRAIREAG
SRAPAVLLTAISGRSVRGVEGADAAEVVLEKPVTRKALARALERAVRAR

Sequences:

>Translated_129_residues
MLSSALQVRRVKVLIADDDRLVRTMVADLLAELGHEVVAAGSGPEAVELAAREAPDLLVLDFLMPRLSGLDALRAIREAG
SRAPAVLLTAISGRSVRGVEGADAAEVVLEKPVTRKALARALERAVRAR
>Mature_129_residues
MLSSALQVRRVKVLIADDDRLVRTMVADLLAELGHEVVAAGSGPEAVELAAREAPDLLVLDFLMPRLSGLDALRAIREAG
SRAPAVLLTAISGRSVRGVEGADAAEVVLEKPVTRKALARALERAVRAR

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787487, Length=79, Percent_Identity=34.1772151898734, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13669; Mature: 13669

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSALQVRRVKVLIADDDRLVRTMVADLLAELGHEVVAAGSGPEAVELAAREAPDLLVL
CCCCHHHHHHHEEEEECCHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHHHCCCCHHHH
DFLMPRLSGLDALRAIREAGSRAPAVLLTAISGRSVRGVEGADAAEVVLEKPVTRKALAR
HHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
ALERAVRAR
HHHHHHHCC
>Mature Secondary Structure
MLSSALQVRRVKVLIADDDRLVRTMVADLLAELGHEVVAAGSGPEAVELAAREAPDLLVL
CCCCHHHHHHHEEEEECCHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHHHCCCCHHHH
DFLMPRLSGLDALRAIREAGSRAPAVLLTAISGRSVRGVEGADAAEVVLEKPVTRKALAR
HHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
ALERAVRAR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]