Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220916294
Identifier: 220916294
GI number: 220916294
Start: 1330220
End: 1331347
Strand: Reverse
Name: 220916294
Synonym: A2cp1_1187
Alternate gene names: NA
Gene position: 1331347-1330220 (Counterclockwise)
Preceding gene: 220916303
Following gene: 220916293
Centisome position: 26.47
GC content: 77.22
Gene sequence:
>1128_bases ATGCCTGAACGGCTTCGGATCGCCTTCTTCGCCTCGAGCCTGGTCTCCGCCTACTGGAACGGGGCGGCCACCTACTACCG CGGGCTCGCGCGCGCGCTCCACGCGCGGGGTCACGCGCTCACCTTCTACGAGCCCGACGCGTTCGAGCGGCAGCGGCACC GGGACATCCCGGATCCGCCGTACGCGCGCTCGGTGGTCTGGGATCCGGGCGATCCCTCCGCGCTGGAGCGCTGCCTGGAG GAGGCCGCCGACGCCGACCTGGTGGTGAAGGCGAGCGGCGTGGGCGTCCACGACGCCCTGCTGGAGGCACGCGTGGCGGG GCTGCGGCGACCGGGGAACCGGGTCGCGTTCTGGGACGTGGACGCGCCCGCCACCCTGGCCCGCCTGGCCGCCGATCCCG GCGACCCGTTCCACGCGCTGGTGCCCCGGTACGACCTCGTGTTCACGTACGGTGGAGGCGATCCGGTCGTCCGCGCCTAC GCGGCCCGCGGGGCGCGGCGCTGCGTGCCGGTCTACAACGCGCTCGATCCCGCGACGCACCACCCGGCCCCGCCCGACCG GCGCTTCGAGGCCGACCTGGCGCTCCTCGCGAACCGGCTCCCCGATCGCGAGGCGCGGGTGGACGAGTTCTTCCTGCGCC CCGCCGCGGCGCTGCCCGATCGCCGCTTCCTGCTCGGCGGGGCGGGCTGGGAGGACCGGGCGGTGCCGCCGAACGTGCGG CGCGCCGGCCACGTCGGCACCGCCGACCACAACGCCTGGAACTCCACCGCGCTGGCGGTGCTGAACGTCTCGCGAGACAG CATGGCCGCGACCGGCTTCTCCCCCGCCACGCGCGTGTTCGAGGCGGCCGGCGCGGGCGCCTGCATCGTCACCGACGCGT GGGAGGGGATCGAGCGGTTCCTCGCGCCCGGCGAGGAGATCCTGGTCGCCCGCGACGGCGCCGAGGTGGCCGCGCTGGTC GCCGGGCTGGACGCGGCGCGCGCCCGCCGCGTCGGCGCCGCCGCCCGCGGCAGGGTGCTCGCCGAGCACACCTACGCGCG CCGCGCCGAGGTGGTGGAGGCGGCGCTCGGGGTCCGCGGCGCCCGGCCCGCCCCGGAGCCGGCGCTCGCCCAGGGGTGGG CCGAATGA
Upstream 100 bases:
>100_bases AGCGCCGAGCGACGCGCGGTCGCTCGGCGCCGACTGCGGGCGGGGGATCGACAACCTACATTTCGTCGAGCGGATGGCCC GGAGGCCGCCCGTCACACCC
Downstream 100 bases:
>100_bases CGGCCGGCGCGCTCGACGTGGTGTTCCTGGGGCTCTCCATCAGGTCTTCGTGGGGCAACGGGCACGCCACGACCTACCGC GCGCTGTGCCGCGCCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MPERLRIAFFASSLVSAYWNGAATYYRGLARALHARGHALTFYEPDAFERQRHRDIPDPPYARSVVWDPGDPSALERCLE EAADADLVVKASGVGVHDALLEARVAGLRRPGNRVAFWDVDAPATLARLAADPGDPFHALVPRYDLVFTYGGGDPVVRAY AARGARRCVPVYNALDPATHHPAPPDRRFEADLALLANRLPDREARVDEFFLRPAAALPDRRFLLGGAGWEDRAVPPNVR RAGHVGTADHNAWNSTALAVLNVSRDSMAATGFSPATRVFEAAGAGACIVTDAWEGIERFLAPGEEILVARDGAEVAALV AGLDAARARRVGAAARGRVLAEHTYARRAEVVEAALGVRGARPAPEPALAQGWAE
Sequences:
>Translated_375_residues MPERLRIAFFASSLVSAYWNGAATYYRGLARALHARGHALTFYEPDAFERQRHRDIPDPPYARSVVWDPGDPSALERCLE EAADADLVVKASGVGVHDALLEARVAGLRRPGNRVAFWDVDAPATLARLAADPGDPFHALVPRYDLVFTYGGGDPVVRAY AARGARRCVPVYNALDPATHHPAPPDRRFEADLALLANRLPDREARVDEFFLRPAAALPDRRFLLGGAGWEDRAVPPNVR RAGHVGTADHNAWNSTALAVLNVSRDSMAATGFSPATRVFEAAGAGACIVTDAWEGIERFLAPGEEILVARDGAEVAALV AGLDAARARRVGAAARGRVLAEHTYARRAEVVEAALGVRGARPAPEPALAQGWAE >Mature_374_residues PERLRIAFFASSLVSAYWNGAATYYRGLARALHARGHALTFYEPDAFERQRHRDIPDPPYARSVVWDPGDPSALERCLEE AADADLVVKASGVGVHDALLEARVAGLRRPGNRVAFWDVDAPATLARLAADPGDPFHALVPRYDLVFTYGGGDPVVRAYA ARGARRCVPVYNALDPATHHPAPPDRRFEADLALLANRLPDREARVDEFFLRPAAALPDRRFLLGGAGWEDRAVPPNVRR AGHVGTADHNAWNSTALAVLNVSRDSMAATGFSPATRVFEAAGAGACIVTDAWEGIERFLAPGEEILVARDGAEVAALVA GLDAARARRVGAAARGRVLAEHTYARRAEVVEAALGVRGARPAPEPALAQGWAE
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40319; Mature: 40187
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERLRIAFFASSLVSAYWNGAATYYRGLARALHARGHALTFYEPDAFERQRHRDIPDPP CCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCC YARSVVWDPGDPSALERCLEEAADADLVVKASGVGVHDALLEARVAGLRRPGNRVAFWDV CCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEC DAPATLARLAADPGDPFHALVPRYDLVFTYGGGDPVVRAYAARGARRCVPVYNALDPATH CCHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEHHHHCCCCCCC HPAPPDRRFEADLALLANRLPDREARVDEFFLRPAAALPDRRFLLGGAGWEDRAVPPNVR CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCCCCCCH RAGHVGTADHNAWNSTALAVLNVSRDSMAATGFSPATRVFEAAGAGACIVTDAWEGIERF HCCCCCCCCCCCCCCEEEEEEEECCHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHH LAPGEEILVARDGAEVAALVAGLDAARARRVGAAARGRVLAEHTYARRAEVVEAALGVRG HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCC ARPAPEPALAQGWAE CCCCCCHHHHCCCCC >Mature Secondary Structure PERLRIAFFASSLVSAYWNGAATYYRGLARALHARGHALTFYEPDAFERQRHRDIPDPP CCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCC YARSVVWDPGDPSALERCLEEAADADLVVKASGVGVHDALLEARVAGLRRPGNRVAFWDV CCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEC DAPATLARLAADPGDPFHALVPRYDLVFTYGGGDPVVRAYAARGARRCVPVYNALDPATH CCHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEHHHHCCCCCCC HPAPPDRRFEADLALLANRLPDREARVDEFFLRPAAALPDRRFLLGGAGWEDRAVPPNVR CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCCCCCCH RAGHVGTADHNAWNSTALAVLNVSRDSMAATGFSPATRVFEAAGAGACIVTDAWEGIERF HCCCCCCCCCCCCCCEEEEEEEECCHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHH LAPGEEILVARDGAEVAALVAGLDAARARRVGAAARGRVLAEHTYARRAEVVEAALGVRG HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCC ARPAPEPALAQGWAE CCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA