Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is zraS [H]
Identifier: 220915998
GI number: 220915998
Start: 1002511
End: 1003875
Strand: Reverse
Name: zraS [H]
Synonym: A2cp1_0884
Alternate gene names: 220915998
Gene position: 1003875-1002511 (Counterclockwise)
Preceding gene: 220916003
Following gene: 220915997
Centisome position: 19.96
GC content: 76.41
Gene sequence:
>1365_bases ATGGTGGTCGCGGCGAGCCGCCCCGCCCCCCGACGGATCGAGCAGATGCCACCGCCCGGCCACGACCAGATCCAGCGCGA GGAGCTGTCCCGGCTGTTCGGGCAGCTCGTCGGCGCGCGCCTGCTGCTGGTGCCGCTGCTGGTCGGCACGGGCGCCTGGA TCGCCTGGGAGGAGCCGGCGGGGTGGCGGCGCGCGCTGCTCGGCGGCCTGCTGGTGCCGGTCTCGGCGTTCTTCATCGTC GAGTACGCCCGCTTCCGGCGGCGCGGCGGCCTCGCGCCCGGCCAGGTCCGGCTCAACCTCTCGGTGGCGGTGATCGCGCA GATGCTGCTCACCGCGGCGACGGGCGGCCTCCAGAGCCCGTTCGTCTACGTGTCGGTGCTCCTGGCGGTGATCGTGAACG TGTTCGTCCGCCCGCCGGTGTCCTCCTGGCTCACCGCGTTCCAGGTGGTGGCCGTCTGGGCGCTCGCCGGGGTCGGCGCC GCCGGCGCGGCACCGCTCGAGATCGAGCTCCTCGGCGGGGCGGCGCGGCGGGCGGTGCCGGTGGGGCTGTGGCTGCACGC GGCGCTCCTCACCGTCGTGCTGGTGGCGATCGCCTTCGCCGGACGGGCCGGCCGCAAGGTGTTCGAGGCCATCATCCGGC GCGCGCTCGCCGCGCAGCAGGACTCGCTCCGCGCCTACGCCGAGCGCGCCGAAGAGCTGACCGCCCTCTCCGGCGAGATC GCGCACGAGCTGAAGAACCCGCTCGCCAGCGTGAAGGGGCTGGCCGGCCTGCTCGCGCAGGGGGTCGGCCCGGGCAAGCC CACCGAGCGGCTCGCGGTGCTCCGCCAGGAGGTGGACCGGATGCAGACCATCCTGGACGGCTTCCTCAACTTCTCCCGGC CGCTCGTGCCGCTCGTGCTCGACGACTGCGACGTGGCCGCGCTGGCGCGCGAGGTCGCGGCGCTGCACGAGGGGCTGGCG CGCGAGCGCGGCGTGGCGCTCGAGGCGCGCGGCGCCGGGGTCCGCGCGCGCTGCGATCCACGCAAGGTGAAGCAGATCCT GGTGAACCTGGTGCAGAACGCGCTCGACGCGAGCCCGGCGGACGCCGCGGTGGAGCTGGTGGCGACGCCGGTGCGCGGCG GCGGGGCGCGCATCCTCGTGCAGGACCGCGGCCCGGGGCTCGACCCCGCGGTGCGCGACGCCGCGTTCTCGCCCGGCTTC ACCACCAAGGCGAGCGGCTCCGGGCTGGGCCTCACCATCGCCCGGTCGCTGGCGCGGCAGCACGGCGGCGACCTGGTCCT CTCCCCGCGCACGGGCGGCGGGATGGTGGCCGAGCTCACCCTGCCCGCGACCCCCGCCGGCGCGGGGACGGGAGCGCTGG CATGA
Upstream 100 bases:
>100_bases TTCCATGGGTCGCGCGAATCTAGCGTGACCCGCGGGCGTCCGCTCGACTTCCTGCATGCGCGTCCGTGCGCCGCCCGTGC GCAGGAACGCCGCCCGTCGT
Downstream 100 bases:
>100_bases GCGAGCAGCCGGAGCGGCGCGGCGGGGCGCGGGTGCTGGTGGTGGACGACGATCCGGGCGTCCGCTACACGCTGCGCGAG ATCCTCGCGTCGGAGGGGCT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MVVAASRPAPRRIEQMPPPGHDQIQREELSRLFGQLVGARLLLVPLLVGTGAWIAWEEPAGWRRALLGGLLVPVSAFFIV EYARFRRRGGLAPGQVRLNLSVAVIAQMLLTAATGGLQSPFVYVSVLLAVIVNVFVRPPVSSWLTAFQVVAVWALAGVGA AGAAPLEIELLGGAARRAVPVGLWLHAALLTVVLVAIAFAGRAGRKVFEAIIRRALAAQQDSLRAYAERAEELTALSGEI AHELKNPLASVKGLAGLLAQGVGPGKPTERLAVLRQEVDRMQTILDGFLNFSRPLVPLVLDDCDVAALAREVAALHEGLA RERGVALEARGAGVRARCDPRKVKQILVNLVQNALDASPADAAVELVATPVRGGGARILVQDRGPGLDPAVRDAAFSPGF TTKASGSGLGLTIARSLARQHGGDLVLSPRTGGGMVAELTLPATPAGAGTGALA
Sequences:
>Translated_454_residues MVVAASRPAPRRIEQMPPPGHDQIQREELSRLFGQLVGARLLLVPLLVGTGAWIAWEEPAGWRRALLGGLLVPVSAFFIV EYARFRRRGGLAPGQVRLNLSVAVIAQMLLTAATGGLQSPFVYVSVLLAVIVNVFVRPPVSSWLTAFQVVAVWALAGVGA AGAAPLEIELLGGAARRAVPVGLWLHAALLTVVLVAIAFAGRAGRKVFEAIIRRALAAQQDSLRAYAERAEELTALSGEI AHELKNPLASVKGLAGLLAQGVGPGKPTERLAVLRQEVDRMQTILDGFLNFSRPLVPLVLDDCDVAALAREVAALHEGLA RERGVALEARGAGVRARCDPRKVKQILVNLVQNALDASPADAAVELVATPVRGGGARILVQDRGPGLDPAVRDAAFSPGF TTKASGSGLGLTIARSLARQHGGDLVLSPRTGGGMVAELTLPATPAGAGTGALA >Mature_454_residues MVVAASRPAPRRIEQMPPPGHDQIQREELSRLFGQLVGARLLLVPLLVGTGAWIAWEEPAGWRRALLGGLLVPVSAFFIV EYARFRRRGGLAPGQVRLNLSVAVIAQMLLTAATGGLQSPFVYVSVLLAVIVNVFVRPPVSSWLTAFQVVAVWALAGVGA AGAAPLEIELLGGAARRAVPVGLWLHAALLTVVLVAIAFAGRAGRKVFEAIIRRALAAQQDSLRAYAERAEELTALSGEI AHELKNPLASVKGLAGLLAQGVGPGKPTERLAVLRQEVDRMQTILDGFLNFSRPLVPLVLDDCDVAALAREVAALHEGLA RERGVALEARGAGVRARCDPRKVKQILVNLVQNALDASPADAAVELVATPVRGGGARILVQDRGPGLDPAVRDAAFSPGF TTKASGSGLGLTIARSLARQHGGDLVLSPRTGGGMVAELTLPATPAGAGTGALA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=33.1932773109244, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788549, Length=257, Percent_Identity=29.9610894941634, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1790300, Length=206, Percent_Identity=29.6116504854369, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1790861, Length=234, Percent_Identity=29.0598290598291, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789808, Length=227, Percent_Identity=26.8722466960352, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87082128, Length=217, Percent_Identity=26.7281105990783, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI87081816, Length=232, Percent_Identity=28.448275862069, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786912, Length=263, Percent_Identity=28.5171102661597, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47374; Mature: 47374
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAASRPAPRRIEQMPPPGHDQIQREELSRLFGQLVGARLLLVPLLVGTGAWIAWEEPA CEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GWRRALLGGLLVPVSAFFIVEYARFRRRGGLAPGQVRLNLSVAVIAQMLLTAATGGLQSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCH FVYVSVLLAVIVNVFVRPPVSSWLTAFQVVAVWALAGVGAAGAAPLEIELLGGAARRAVP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH VGLWLHAALLTVVLVAIAFAGRAGRKVFEAIIRRALAAQQDSLRAYAERAEELTALSGEI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHELKNPLASVKGLAGLLAQGVGPGKPTERLAVLRQEVDRMQTILDGFLNFSRPLVPLVL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC DDCDVAALAREVAALHEGLARERGVALEARGAGVRARCDPRKVKQILVNLVQNALDASPA CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH DAAVELVATPVRGGGARILVQDRGPGLDPAVRDAAFSPGFTTKASGSGLGLTIARSLARQ HHHHHHHEECCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH HGGDLVLSPRTGGGMVAELTLPATPAGAGTGALA CCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MVVAASRPAPRRIEQMPPPGHDQIQREELSRLFGQLVGARLLLVPLLVGTGAWIAWEEPA CEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GWRRALLGGLLVPVSAFFIVEYARFRRRGGLAPGQVRLNLSVAVIAQMLLTAATGGLQSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCH FVYVSVLLAVIVNVFVRPPVSSWLTAFQVVAVWALAGVGAAGAAPLEIELLGGAARRAVP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH VGLWLHAALLTVVLVAIAFAGRAGRKVFEAIIRRALAAQQDSLRAYAERAEELTALSGEI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHELKNPLASVKGLAGLLAQGVGPGKPTERLAVLRQEVDRMQTILDGFLNFSRPLVPLVL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC DDCDVAALAREVAALHEGLARERGVALEARGAGVRARCDPRKVKQILVNLVQNALDASPA CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH DAAVELVATPVRGGGARILVQDRGPGLDPAVRDAAFSPGFTTKASGSGLGLTIARSLARQ HHHHHHHEECCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH HGGDLVLSPRTGGGMVAELTLPATPAGAGTGALA CCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]