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The map label for this gene is fdhD

Identifier: 220915991

GI number: 220915991

Start: 992498

End: 993364

Strand: Reverse

Name: fdhD

Synonym: A2cp1_0877

Alternate gene names: 220915991

Gene position: 993364-992498 (Counterclockwise)

Preceding gene: 220915994

Following gene: 220915990

Centisome position: 19.75

GC content: 77.62

Gene sequence:

>867_bases
ATGGAAACCTCCCTCAGGCGCGCCGCCGCGCCGGCGGGCGCCGTGGCGGAGCGGACGGTGCTGCGAAACGGCGGCGCCGT
GCGCGACGCCGTCGCCGTCGAGGAGCCGCTCGAGATCCGCGTGGACGGCGACCGGCTCGCGACGACCATGCGGACGCCCG
GCGCCGACGCCGACCTGGCGCTCGGCTTCCTGTTCGCCGAGGGCATCATCGCCGGCGTCGAGGACGTGGGAACGGTCATC
CACTGCGGCCGGCCCGGCGAGGAGGGGTACGGCAACGTGATGGACGTCCGGTCCGCGGCCGGCATGCGCATCGACCCCGA
GCGGATCCTGGAAGGCCGCCGGTTCGTCCCGGTGAGCGCCGCCTGCGGCGTCTGCGGCCGGCTGAGCATCGACCACCTCA
TGGAGCGGATCCACCCGCTGCCGGCGGGCGAGCCGGTCGCGCCGGCGCTCGTCGCGGCCGGCATGGAGATCCTGGCGCGC
AGCCAGCCCGTGTTCGAGCGCACCGGCGGGCTGCACGCGGCGGTGCTGGTGGGCCGCGACGGCGCGCCGATCGCGTCCGC
GGAGGACGTGGGGCGGCACAACGCGGTGGACAAGGTGGTCGGCGCCGCGCTGCGGGCGGGGCGCGTCGGCCCGCGCGCCG
CGGCCGGCCCCGCGCCGGCGCTGCTCGCGGTGAGCGGGCGCGCCGGCTTCGAGATCGTGCAGAAGGCCGCGGCGGCCGGC
GTGCCGGTGATCGCGAGCGTGTCGGCGCCGTCCAGCCTGGCCGTGGACCTGGCCCGCGCCGCCGGCGTGACGCTCTGCGG
CTTCGTGCGCGGCGAGCGCATGAACGTCTACGCGAACGGCGAGCGCCTCGGGCTGACCGGGCCCTGA

Upstream 100 bases:

>100_bases
ACGGCGGCAGCTCCCGGGGCGCGCGACCGGACCGCCCGGCGCGCGCCCCACCTCCGCTCTTTTCCGCCCGCGCGGGCGGC
CGCTCCGTTACCTTCCCGCC

Downstream 100 bases:

>100_bases
GAGCACGCGCTCTGAGAGCACGTGAACCCATCCCCTCCCGTCGCCGCGGCGGCCGATCCGCGTCGCATCGCGTCGTTGCT
CCTCCCTCACATGCCGACGG

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
METSLRRAAAPAGAVAERTVLRNGGAVRDAVAVEEPLEIRVDGDRLATTMRTPGADADLALGFLFAEGIIAGVEDVGTVI
HCGRPGEEGYGNVMDVRSAAGMRIDPERILEGRRFVPVSAACGVCGRLSIDHLMERIHPLPAGEPVAPALVAAGMEILAR
SQPVFERTGGLHAAVLVGRDGAPIASAEDVGRHNAVDKVVGAALRAGRVGPRAAAGPAPALLAVSGRAGFEIVQKAAAAG
VPVIASVSAPSSLAVDLARAAGVTLCGFVRGERMNVYANGERLGLTGP

Sequences:

>Translated_288_residues
METSLRRAAAPAGAVAERTVLRNGGAVRDAVAVEEPLEIRVDGDRLATTMRTPGADADLALGFLFAEGIIAGVEDVGTVI
HCGRPGEEGYGNVMDVRSAAGMRIDPERILEGRRFVPVSAACGVCGRLSIDHLMERIHPLPAGEPVAPALVAAGMEILAR
SQPVFERTGGLHAAVLVGRDGAPIASAEDVGRHNAVDKVVGAALRAGRVGPRAAAGPAPALLAVSGRAGFEIVQKAAAAG
VPVIASVSAPSSLAVDLARAAGVTLCGFVRGERMNVYANGERLGLTGP
>Mature_288_residues
METSLRRAAAPAGAVAERTVLRNGGAVRDAVAVEEPLEIRVDGDRLATTMRTPGADADLALGFLFAEGIIAGVEDVGTVI
HCGRPGEEGYGNVMDVRSAAGMRIDPERILEGRRFVPVSAACGVCGRLSIDHLMERIHPLPAGEPVAPALVAAGMEILAR
SQPVFERTGGLHAAVLVGRDGAPIASAEDVGRHNAVDKVVGAALRAGRVGPRAAAGPAPALLAVSGRAGFEIVQKAAAAG
VPVIASVSAPSSLAVDLARAAGVTLCGFVRGERMNVYANGERLGLTGP

Specific function: Necessary for formate dehydrogenase activity

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family

Homologues:

Organism=Escherichia coli, GI1790329, Length=265, Percent_Identity=32.0754716981132, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHD_ANAD2 (B8JDY4)

Other databases:

- EMBL:   CP001359
- RefSeq:   YP_002491295.1
- ProteinModelPortal:   B8JDY4
- SMR:   B8JDY4
- GeneID:   7299426
- GenomeReviews:   CP001359_GR
- KEGG:   acp:A2cp1_0877
- HOGENOM:   HBG732883
- ProtClustDB:   CLSK945278
- GO:   GO:0005737
- HAMAP:   MF_00187
- InterPro:   IPR003786
- TIGRFAMs:   TIGR00129

Pfam domain/function: PF02634 FdhD-NarQ

EC number: NA

Molecular weight: Translated: 29305; Mature: 29305

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSLRRAAAPAGAVAERTVLRNGGAVRDAVAVEEPLEIRVDGDRLATTMRTPGADADLA
CCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEECCHHHHHEECCCCCCHHHH
LGFLFAEGIIAGVEDVGTVIHCGRPGEEGYGNVMDVRSAAGMRIDPERILEGRRFVPVSA
HHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCEEEHHH
ACGVCGRLSIDHLMERIHPLPAGEPVAPALVAAGMEILARSQPVFERTGGLHAAVLVGRD
HHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECC
GAPIASAEDVGRHNAVDKVVGAALRAGRVGPRAAAGPAPALLAVSGRAGFEIVQKAAAAG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
VPVIASVSAPSSLAVDLARAAGVTLCGFVRGERMNVYANGERLGLTGP
CCEEEECCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEECCCCC
>Mature Secondary Structure
METSLRRAAAPAGAVAERTVLRNGGAVRDAVAVEEPLEIRVDGDRLATTMRTPGADADLA
CCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEECCHHHHHEECCCCCCHHHH
LGFLFAEGIIAGVEDVGTVIHCGRPGEEGYGNVMDVRSAAGMRIDPERILEGRRFVPVSA
HHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCEEEHHH
ACGVCGRLSIDHLMERIHPLPAGEPVAPALVAAGMEILARSQPVFERTGGLHAAVLVGRD
HHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECC
GAPIASAEDVGRHNAVDKVVGAALRAGRVGPRAAAGPAPALLAVSGRAGFEIVQKAAAAG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
VPVIASVSAPSSLAVDLARAAGVTLCGFVRGERMNVYANGERLGLTGP
CCEEEECCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA