| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915922
Identifier: 220915922
GI number: 220915922
Start: 908121
End: 908591
Strand: Reverse
Name: 220915922
Synonym: A2cp1_0808
Alternate gene names: NA
Gene position: 908591-908121 (Counterclockwise)
Preceding gene: 220915924
Following gene: 220915919
Centisome position: 18.07
GC content: 75.16
Gene sequence:
>471_bases ATGATCCCCGAGCGCATCGACCGGTACCTGCGCGCGCACCACCCCGGCTGCGCGCACACCATCCACCTGCGCGCGGTGGC GGCGCAGCGCCTCGCCGCCGCGGAGCACGTGAGCGGGACGCGGGTGGCGAAGACGGTGGTGGTGAGCCTCGACGGCGCCA TGGCGCTCGCGGTGGTGGGCGCGGATCGCGTGGTCGACCTCGACGTGCTGCGGAGCGTGAGCGGCGCTGCGCACGCCGGG TTCGTGCCGGAGACGGCCTTCGCGAACCGCTTCGAGCCGTGCGAGGCCGGCGCCGAGCCGCCGCTCGGCGTGTTCGGGCT GCCCATCTACGTGGACGCGGCGCTGGCGCAGCAGCCCTGGATCGTGATGCGCGGGGGCACGCACGAGGACGCGGTCCGCC TGCGCACCGACGAGTGGCTGCGCGAGGAGCACGCCACGGTGGTGGACGAGCTGGGCCGGGTCCGGATGTAG
Upstream 100 bases:
>100_bases CGCGGCCGGGCGCCTGGCCCGCCGGTGGGGTTCCACCTGGGCGCCTCCCGCCCGGGCGGCGGGCTGGATATGGGTCAACG CGTACGGACAGGAGGGCGCC
Downstream 100 bases:
>100_bases CGTCGGCGGGTCAGCGCCCGCGCTTCTGGTACGTGCCCATGAGCTGGGCCTGCTCGAGCACGTGCCCGCGGATCGCCTCG AGCACGCGCGCGCGGGTGGG
Product: YbaK/prolyl-tRNA synthetase associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MIPERIDRYLRAHHPGCAHTIHLRAVAAQRLAAAEHVSGTRVAKTVVVSLDGAMALAVVGADRVVDLDVLRSVSGAAHAG FVPETAFANRFEPCEAGAEPPLGVFGLPIYVDAALAQQPWIVMRGGTHEDAVRLRTDEWLREEHATVVDELGRVRM
Sequences:
>Translated_156_residues MIPERIDRYLRAHHPGCAHTIHLRAVAAQRLAAAEHVSGTRVAKTVVVSLDGAMALAVVGADRVVDLDVLRSVSGAAHAG FVPETAFANRFEPCEAGAEPPLGVFGLPIYVDAALAQQPWIVMRGGTHEDAVRLRTDEWLREEHATVVDELGRVRM >Mature_156_residues MIPERIDRYLRAHHPGCAHTIHLRAVAAQRLAAAEHVSGTRVAKTVVVSLDGAMALAVVGADRVVDLDVLRSVSGAAHAG FVPETAFANRFEPCEAGAEPPLGVFGLPIYVDAALAQQPWIVMRGGTHEDAVRLRTDEWLREEHATVVDELGRVRM
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16874; Mature: 16874
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPERIDRYLRAHHPGCAHTIHLRAVAAQRLAAAEHVSGTRVAKTVVVSLDGAMALAVVG CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCEEEEEEC ADRVVDLDVLRSVSGAAHAGFVPETAFANRFEPCEAGAEPPLGVFGLPIYVDAALAQQPW CCCEEHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCE IVMRGGTHEDAVRLRTDEWLREEHATVVDELGRVRM EEEECCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIPERIDRYLRAHHPGCAHTIHLRAVAAQRLAAAEHVSGTRVAKTVVVSLDGAMALAVVG CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCEEEEEEC ADRVVDLDVLRSVSGAAHAGFVPETAFANRFEPCEAGAEPPLGVFGLPIYVDAALAQQPW CCCEEHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCE IVMRGGTHEDAVRLRTDEWLREEHATVVDELGRVRM EEEECCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA