Click here to switch to the map view.

The map label for this gene is ydiK [C]

Identifier: 220915912

GI number: 220915912

Start: 898853

End: 899995

Strand: Reverse

Name: ydiK [C]

Synonym: A2cp1_0798

Alternate gene names: 220915912

Gene position: 899995-898853 (Counterclockwise)

Preceding gene: 220915913

Following gene: 220915910

Centisome position: 17.89

GC content: 75.68

Gene sequence:

>1143_bases
GTGACCGCCACGCCCGACAGCGACCTGCACGCCCGCCGGCTGCTCCTCGCCCTGCTGGTGCTGGCGCTGTTCCTCGCCGG
CTGGATGGTGAAGCCGTTCTGGGTGGCGTTCTTCCTGGCCGCGGTGCTGACCGCGGCGCTCCGGCGCTGGATGGAGTGGC
TGTCGGCGCGCCTGCGCGGGCGCCGCGCGCTCGCCGCCGGGCTGCTCACGGCGGGCGTGCTGCTCGCGGGGGTCGTCCCG
GTCGCCGCGCTCGGCGCGGTGCTGATCCGCGAGGCGGTGGACGGGATCCAGTGGCTGCGCAGCGCGCTCCAGAGCGAGGG
GGTCTGGGGGCTGGTGAGCCGCCTGCCCGGGCCGATCGAGGAGCTCGCCCACCGCGCCGTCACCGCGCTCGGCGATCCGG
AGCGCCAGCTCCAGCAGCTCGCCGGGCAGGGCGGGCAGGCCGCCGCCGCGGTGGGCGGGGTGCTCGCCGCCACCGGCACG
TTCGTGCTGCAGACGGTGTTGATGCTCATCGCGCTGTTCTTCTTCCTGGTGGACGGGCAGCGGCTCATCGCCTGGGTGGA
CGCGCGCGTGCCGCTGCGGGCGGGTCAGTTCCGGACGCTGGTGGAGGACTTCCGGCGCACCACGCTGTCGGTCGTGGCCG
CGACCGCCGCCACCGCCGGGATCCAGACCGTGACCGCGCTCGCCGGGTACCTCATCGCGCGCGCGCCCAACCCGATCTTC
CTGGCGGTCCTCACCCTGGTGGTGGCGCTCATCCCCGCGGTGGGCGCGACCGCCATGGTGCTGGCGGTCGCGGCGCTGCA
GCTCGCCACCGGCCACACCGTGTCCGGGATCTTCCTCGCGATCTGGGGCGCGGCGGTGGTGTCGCTCGTGGACAACGTGG
CGCGCCCCTACCTGCTGAAGGGCGGGATGGCGCTGCACGGCGGCGTGGTGTTCTTCGCGCTGCTCGGCGGCCTGGCCGCG
TTCGGCGGCATCGGCCTCATCCTCGGCCCGCTCGTGGTGACGTTCCTGGTGACGGTGCTGAACATGTACCGGCGCGAGCT
CGGCAAGAGGCCCGCCGCCCCGACGCCCGCGCCCGCCCCGGCAGCCGGGCCCGGGGACGCCGAGGACGCGGTCGGAGCTC
CCCGCCAGGACACGCGGGGCTGA

Upstream 100 bases:

>100_bases
GGGATGACCGCCATGGTGGACGACGTGCGCCGGGTCCTCGCCGGCGCCGGCATCCCCCCGCAGCGTGTGTTCGCGAACTT
CTGAACGCCCAGGAGAGCCG

Downstream 100 bases:

>100_bases
GAGCAGGTGAACCCATCCCCTCCCGTCGCCGCGGCGGCCGATCCGCGTCGCATCGCTTCGTTGCTCCTCCCTCACATGCC
GACGGGCATGCTCGGTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTATPDSDLHARRLLLALLVLALFLAGWMVKPFWVAFFLAAVLTAALRRWMEWLSARLRGRRALAAGLLTAGVLLAGVVP
VAALGAVLIREAVDGIQWLRSALQSEGVWGLVSRLPGPIEELAHRAVTALGDPERQLQQLAGQGGQAAAAVGGVLAATGT
FVLQTVLMLIALFFFLVDGQRLIAWVDARVPLRAGQFRTLVEDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIF
LAVLTLVVALIPAVGATAMVLAVAALQLATGHTVSGIFLAIWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAA
FGGIGLILGPLVVTFLVTVLNMYRRELGKRPAAPTPAPAPAAGPGDAEDAVGAPRQDTRG

Sequences:

>Translated_380_residues
MTATPDSDLHARRLLLALLVLALFLAGWMVKPFWVAFFLAAVLTAALRRWMEWLSARLRGRRALAAGLLTAGVLLAGVVP
VAALGAVLIREAVDGIQWLRSALQSEGVWGLVSRLPGPIEELAHRAVTALGDPERQLQQLAGQGGQAAAAVGGVLAATGT
FVLQTVLMLIALFFFLVDGQRLIAWVDARVPLRAGQFRTLVEDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIF
LAVLTLVVALIPAVGATAMVLAVAALQLATGHTVSGIFLAIWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAA
FGGIGLILGPLVVTFLVTVLNMYRRELGKRPAAPTPAPAPAAGPGDAEDAVGAPRQDTRG
>Mature_379_residues
TATPDSDLHARRLLLALLVLALFLAGWMVKPFWVAFFLAAVLTAALRRWMEWLSARLRGRRALAAGLLTAGVLLAGVVPV
AALGAVLIREAVDGIQWLRSALQSEGVWGLVSRLPGPIEELAHRAVTALGDPERQLQQLAGQGGQAAAAVGGVLAATGTF
VLQTVLMLIALFFFLVDGQRLIAWVDARVPLRAGQFRTLVEDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIFL
AVLTLVVALIPAVGATAMVLAVAALQLATGHTVSGIFLAIWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAAF
GGIGLILGPLVVTFLVTVLNMYRRELGKRPAAPTPAPAPAAGPGDAEDAVGAPRQDTRG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39476; Mature: 39345

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
TATPDSDLHARRLLLALLVLALFLAGWMVKPFWVAFFLAAVLTAALRRWMEWLSARLRG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRALAAGLLTAGVLLAGVVPVAALGAVLIREAVDGIQWLRSALQSEGVWGLVSRLPGPIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHH
ELAHRAVTALGDPERQLQQLAGQGGQAAAAVGGVLAATGTFVLQTVLMLIALFFFLVDGQ
HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLIAWVDARVPLRAGQFRTLVEDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIF
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAVLTLVVALIPAVGATAMVLAVAALQLATGHTVSGIFLAIWGAAVVSLVDNVARPYLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGMALHGGVVFFALLGGLAAFGGIGLILGPLVVTFLVTVLNMYRRELGKRPAAPTPAPAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AAGPGDAEDAVGAPRQDTRG
CCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]