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The map label for this gene is yscT [H]

Identifier: 220915854

GI number: 220915854

Start: 832841

End: 833617

Strand: Reverse

Name: yscT [H]

Synonym: A2cp1_0737

Alternate gene names: 220915854

Gene position: 833617-832841 (Counterclockwise)

Preceding gene: 220915855

Following gene: 220915853

Centisome position: 16.58

GC content: 82.5

Gene sequence:

>777_bases
GTGACCGAGCTCGCCCCGGAGCTCCTGCCGCGGCTCGCCGGCGCGCTGCTCCACGCGCTGCGGCTCGCGCCGGTGGTGAT
GCTCTCGCCGCTGCTGGGCGGCCCGATGGCCCCGCCGGTGGCGCGGGTGGGGCTCGCGCTCGGGCTGGGCGGCGCGGCGG
CGCTCGCCGCGGGCGCGCCCGCCGCGCCGGCAGAGGCGATCGCCTTCGCCGTCGCGGCCGCCCGCGAGGCGGCGCTCGGC
CTCGCGCTGGGCCTGCTCTCGGCGGCGCCGGTGGAGGCCGCTCGCGCCGCGGGGCGCCTCGCCGACACCTTCCGCGGCGC
CACGCTCAGCGAGCTCCACGTGGCGCCGGTCCGGCAGCGCGAGAGCGCCTCCGGCGACCTGCTCGCGCACTGGGTGGTGG
TCCTGGCCGCGTGGGGCGGCGGCGATCGCCTGGTGCTCCGGGGGCTGCTGGCGAGCTTCGCGACGCTGCCCGCCGGGGCG
CCGTTCCCGGCGGGCGCGGCCCGCGAGGTGGTCCTGCACGCGTCTGCGGAGCTGCTCGCGGCCGCGGTGGCGGTCGCGGC
GCCCGCCGCCGCGGGGGTGCTCGCGGCCGACCTGGCCCTGTCGCTGGCGGCGCGCGTCGCGCCGCAGCTCGGACCGGTGA
ACGTGGCGCAGCCGGCGCGCGCCGCGTTGGGGCTGGCGCTGCTCGCGGCGGCCGCGAGCGCCGGCGCTGGGCGGCTGGTC
TCGCTGGCCGCGCTCCCCGGCCAGCTGGTCGCCGTGCTCTCCGGAGGCCGCCCGTGA

Upstream 100 bases:

>100_bases
TCGCGGTGGTGATCTCGCTCGCGATCGCGGCGCCCTGGATCGGCGCCCGCGCGGTGCGGTTCGCCGCCGATTGCTTCGCG
CTCGTGCCCCGGATCGCGCC

Downstream 100 bases:

>100_bases
GCGGCAACCGCACCGAGCAGCCCACCCCGCGACGGCTGCGCGAGGCGCGCCGGCGCGGCGAGGTGGCGGTCAGCCGCGAG
CTCACCGGCGCCGCGGCGCT

Product: type III secretion system inner membrane R protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTELAPELLPRLAGALLHALRLAPVVMLSPLLGGPMAPPVARVGLALGLGGAAALAAGAPAAPAEAIAFAVAAAREAALG
LALGLLSAAPVEAARAAGRLADTFRGATLSELHVAPVRQRESASGDLLAHWVVVLAAWGGGDRLVLRGLLASFATLPAGA
PFPAGAAREVVLHASAELLAAAVAVAAPAAAGVLAADLALSLAARVAPQLGPVNVAQPARAALGLALLAAAASAGAGRLV
SLAALPGQLVAVLSGGRP

Sequences:

>Translated_258_residues
MTELAPELLPRLAGALLHALRLAPVVMLSPLLGGPMAPPVARVGLALGLGGAAALAAGAPAAPAEAIAFAVAAAREAALG
LALGLLSAAPVEAARAAGRLADTFRGATLSELHVAPVRQRESASGDLLAHWVVVLAAWGGGDRLVLRGLLASFATLPAGA
PFPAGAAREVVLHASAELLAAAVAVAAPAAAGVLAADLALSLAARVAPQLGPVNVAQPARAALGLALLAAAASAGAGRLV
SLAALPGQLVAVLSGGRP
>Mature_257_residues
TELAPELLPRLAGALLHALRLAPVVMLSPLLGGPMAPPVARVGLALGLGGAAALAAGAPAAPAEAIAFAVAAAREAALGL
ALGLLSAAPVEAARAAGRLADTFRGATLSELHVAPVRQRESASGDLLAHWVVVLAAWGGGDRLVLRGLLASFATLPAGAP
FPAGAAREVVLHASAELLAAAVAVAAPAAAGVLAADLALSLAARVAPQLGPVNVAQPARAALGLALLAAAASAGAGRLVS
LAALPGQLVAVLSGGRP

Specific function: Component of the yop secretion machinery [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 24812; Mature: 24681

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELAPELLPRLAGALLHALRLAPVVMLSPLLGGPMAPPVARVGLALGLGGAAALAAGAP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCC
AAPAEAIAFAVAAAREAALGLALGLLSAAPVEAARAAGRLADTFRGATLSELHVAPVRQR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
ESASGDLLAHWVVVLAAWGGGDRLVLRGLLASFATLPAGAPFPAGAAREVVLHASAELLA
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AAVAVAAPAAAGVLAADLALSLAARVAPQLGPVNVAQPARAALGLALLAAAASAGAGRLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
SLAALPGQLVAVLSGGRP
HHHHCCHHHHHHHCCCCC
>Mature Secondary Structure 
TELAPELLPRLAGALLHALRLAPVVMLSPLLGGPMAPPVARVGLALGLGGAAALAAGAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCC
AAPAEAIAFAVAAAREAALGLALGLLSAAPVEAARAAGRLADTFRGATLSELHVAPVRQR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
ESASGDLLAHWVVVLAAWGGGDRLVLRGLLASFATLPAGAPFPAGAAREVVLHASAELLA
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AAVAVAAPAAAGVLAADLALSLAARVAPQLGPVNVAQPARAALGLALLAAAASAGAGRLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
SLAALPGQLVAVLSGGRP
HHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]