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The map label for this gene is ompW [C]

Identifier: 220915683

GI number: 220915683

Start: 643417

End: 644043

Strand: Direct

Name: ompW [C]

Synonym: A2cp1_0564

Alternate gene names: 220915683

Gene position: 643417-644043 (Clockwise)

Preceding gene: 220915681

Following gene: 220915684

Centisome position: 12.79

GC content: 70.02

Gene sequence:

>627_bases
ATGAAGCGGATGCTGCTCGTGATGGCGCTCGCGGTCGCGATGGCGCCGGTGGCGAAGGCGCAGGAGCCCACCCCGGAGTC
GGGCCTGATGGTCCGGCTGCGCGCGCTCTCCCTGCGCCCGGCCGACCGGTCCGACGCGATCCCCGCGCTCGGCGTCCCGA
AGGACGCGATCACCGTGAGTGACAAGGTCATCCCGGAGGTCGATCTCTCCTGGTTCTTCAACCGCTACCTCGCGGCCGAG
CTCATCCTGACCTACCCGCAGGAGCACGACGTGAAGCTGTCGGGCACGAAGATCGGCACGTTCAGCCACCTGCCCCCGAC
GCTCACCGTGCAGGGCCACCTGCCGCTCGGCCGGGTGAAGCCGTACCTCGGCGCCGGCGTGAACCTCACGCTCGTCACCG
ACACGAGCCTGAGCGTGCCCGGCGTGGGCAAGCTCGAGCTGGAGGACTACAGCTTCGGGCTCGCGGCCCAGGCGGGCCTG
GACGTGCGGGTGACCGGCCGCTGGTACGTCAACGCGGACGTGAAGTACGTCACGATCCGGTCCGACGTGAAGGCGGGCGG
GACGAAGGTGAGCGAGGTCCGCGTCGATCCGTGGCTGATCGGCGGCGGGGTCGGTTACCGGTTCTAG

Upstream 100 bases:

>100_bases
GCCCGTCGCGCTGCGCACCTCCGCGGCGGCGCCCCGGTTGCAGAGCAGGCCGCGCACACAACGTGACGGCCGGGCGCGCC
CGGCCTCCAAGGAGAGCCCG

Downstream 100 bases:

>100_bases
ACGGGAGGCGACCCGGCCGCGCGCGTGACGTGCGCGTTCTTGCGCGGGCCCTGCGCCAACCTGCGCGTTCAGCCGGCGCG
CGCCCGCTGGTATCTCCCCG

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKRMLLVMALAVAMAPVAKAQEPTPESGLMVRLRALSLRPADRSDAIPALGVPKDAITVSDKVIPEVDLSWFFNRYLAAE
LILTYPQEHDVKLSGTKIGTFSHLPPTLTVQGHLPLGRVKPYLGAGVNLTLVTDTSLSVPGVGKLELEDYSFGLAAQAGL
DVRVTGRWYVNADVKYVTIRSDVKAGGTKVSEVRVDPWLIGGGVGYRF

Sequences:

>Translated_208_residues
MKRMLLVMALAVAMAPVAKAQEPTPESGLMVRLRALSLRPADRSDAIPALGVPKDAITVSDKVIPEVDLSWFFNRYLAAE
LILTYPQEHDVKLSGTKIGTFSHLPPTLTVQGHLPLGRVKPYLGAGVNLTLVTDTSLSVPGVGKLELEDYSFGLAAQAGL
DVRVTGRWYVNADVKYVTIRSDVKAGGTKVSEVRVDPWLIGGGVGYRF
>Mature_208_residues
MKRMLLVMALAVAMAPVAKAQEPTPESGLMVRLRALSLRPADRSDAIPALGVPKDAITVSDKVIPEVDLSWFFNRYLAAE
LILTYPQEHDVKLSGTKIGTFSHLPPTLTVQGHLPLGRVKPYLGAGVNLTLVTDTSLSVPGVGKLELEDYSFGLAAQAGL
DVRVTGRWYVNADVKYVTIRSDVKAGGTKVSEVRVDPWLIGGGVGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=221, Percent_Identity=30.316742081448, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22441; Mature: 22441

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMLLVMALAVAMAPVAKAQEPTPESGLMVRLRALSLRPADRSDAIPALGVPKDAITVS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEC
DKVIPEVDLSWFFNRYLAAELILTYPQEHDVKLSGTKIGTFSHLPPTLTVQGHLPLGRVK
CCCCCCCCHHHHHHHHHHEEHEEECCCCCCEEECCEEEECCCCCCCEEEEECCCCHHHCC
PYLGAGVNLTLVTDTSLSVPGVGKLELEDYSFGLAAQAGLDVRVTGRWYVNADVKYVTIR
HHHCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEEEEECCEEEEEEE
SDVKAGGTKVSEVRVDPWLIGGGVGYRF
CCCCCCCCEEEEEEECCEEEECCCCCCC
>Mature Secondary Structure
MKRMLLVMALAVAMAPVAKAQEPTPESGLMVRLRALSLRPADRSDAIPALGVPKDAITVS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEC
DKVIPEVDLSWFFNRYLAAELILTYPQEHDVKLSGTKIGTFSHLPPTLTVQGHLPLGRVK
CCCCCCCCHHHHHHHHHHEEHEEECCCCCCEEECCEEEECCCCCCCEEEEECCCCHHHCC
PYLGAGVNLTLVTDTSLSVPGVGKLELEDYSFGLAAQAGLDVRVTGRWYVNADVKYVTIR
HHHCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEEEEECCEEEEEEE
SDVKAGGTKVSEVRVDPWLIGGGVGYRF
CCCCCCCCEEEEEEECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]