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The map label for this gene is ygeA [H]

Identifier: 220915676

GI number: 220915676

Start: 635948

End: 636652

Strand: Direct

Name: ygeA [H]

Synonym: A2cp1_0557

Alternate gene names: 220915676

Gene position: 635948-636652 (Clockwise)

Preceding gene: 220915675

Following gene: 220915680

Centisome position: 12.64

GC content: 74.61

Gene sequence:

>705_bases
ATGCAGCCGATCGTCGGAATCGTGGGCGGGCTCGGTCCCGAGGGGACCGTCCACTACTACCGGAAGCTCACCGCCCTGCT
CGCCGGGCTGCCCCTCGACCTGGGCCGGCCGGGCATCGTCGTGGACCACGTCTGGATCGACCGGTTCTCGGGGCTGCTCC
GCGCGGGAGCGGACCCGGAGGCGCTGGAGCTGTTGCTGGGCTCGCTCCGGCGGCTCGAGCGCGCCGGCGCCACCCTGGCG
CTCTTCGCGGCGGTGACGCCGCACCGGTTCCTGCCGGCGCTCCGGCCTCGCTCGCCCCTGCCCATCGCCGACCTGGTGGG
CGCGACCTGCGAGGACGTGCGCGCCGCCGGCCACCGCGTGGTCGGGCTCGTCGGCACGCGCTTCACCGTTTCCGAGCCGT
TCTTCCGCGACGCGCTCGAGGCGGCCGGCGTGCGGGTGGTGGTCCCGGACGAGGCCGGGACCGACTACCTGGACGCGCTC
ATCTTCGGGCCGCTCGCGCGCGGCGAGAAGACGCCGACGATGAAGGGCGAGCTCGCCGCGATCGTGGGCCGCATGGCCAG
GCGGGAGCCGCTCGACGCGCTGGTCGTCGCCTGCACCGATCTCATGGACCTCATGGGGACCGAGGTCCCGCTCCTCGATC
CGATCGACAGCCACCTGCGCCTGGCGCTCCGGATGCTCGCGGCGTCCGGAGCGCGGGCGCAGTGA

Upstream 100 bases:

>100_bases
CCATGGGCGCGCTGCTCGCCGCCTCGGCCGCCCTGCTGCTCGCGGGCGCCTGAGCGAGAGCAGCCTCCGCCTCTTACACC
CCAGCACGAGGTTCCATCGC

Downstream 100 bases:

>100_bases
CGGCTCACATGGGCGGCAGCGCCGCCATGCGCCGCTGCATCTCCTCCGGCGAGACGTCCTCCTTGTGCGTGCCGACGTGC
CAGAGGTGGCCGAACGGATC

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MQPIVGIVGGLGPEGTVHYYRKLTALLAGLPLDLGRPGIVVDHVWIDRFSGLLRAGADPEALELLLGSLRRLERAGATLA
LFAAVTPHRFLPALRPRSPLPIADLVGATCEDVRAAGHRVVGLVGTRFTVSEPFFRDALEAAGVRVVVPDEAGTDYLDAL
IFGPLARGEKTPTMKGELAAIVGRMARREPLDALVVACTDLMDLMGTEVPLLDPIDSHLRLALRMLAASGARAQ

Sequences:

>Translated_234_residues
MQPIVGIVGGLGPEGTVHYYRKLTALLAGLPLDLGRPGIVVDHVWIDRFSGLLRAGADPEALELLLGSLRRLERAGATLA
LFAAVTPHRFLPALRPRSPLPIADLVGATCEDVRAAGHRVVGLVGTRFTVSEPFFRDALEAAGVRVVVPDEAGTDYLDAL
IFGPLARGEKTPTMKGELAAIVGRMARREPLDALVVACTDLMDLMGTEVPLLDPIDSHLRLALRMLAASGARAQ
>Mature_234_residues
MQPIVGIVGGLGPEGTVHYYRKLTALLAGLPLDLGRPGIVVDHVWIDRFSGLLRAGADPEALELLLGSLRRLERAGATLA
LFAAVTPHRFLPALRPRSPLPIADLVGATCEDVRAAGHRVVGLVGTRFTVSEPFFRDALEAAGVRVVVPDEAGTDYLDAL
IFGPLARGEKTPTMKGELAAIVGRMARREPLDALVVACTDLMDLMGTEVPLLDPIDSHLRLALRMLAASGARAQ

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=214, Percent_Identity=24.7663551401869, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 24890; Mature: 24890

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPIVGIVGGLGPEGTVHYYRKLTALLAGLPLDLGRPGIVVDHVWIDRFSGLLRAGADPE
CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHH
ALELLLGSLRRLERAGATLALFAAVTPHRFLPALRPRSPLPIADLVGATCEDVRAAGHRV
HHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHCCCCE
VGLVGTRFTVSEPFFRDALEAAGVRVVVPDEAGTDYLDALIFGPLARGEKTPTMKGELAA
EEEECCCEECCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
IVGRMARREPLDALVVACTDLMDLMGTEVPLLDPIDSHLRLALRMLAASGARAQ
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQPIVGIVGGLGPEGTVHYYRKLTALLAGLPLDLGRPGIVVDHVWIDRFSGLLRAGADPE
CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHH
ALELLLGSLRRLERAGATLALFAAVTPHRFLPALRPRSPLPIADLVGATCEDVRAAGHRV
HHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHCCCCE
VGLVGTRFTVSEPFFRDALEAAGVRVVVPDEAGTDYLDALIFGPLARGEKTPTMKGELAA
EEEECCCEECCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
IVGRMARREPLDALVVACTDLMDLMGTEVPLLDPIDSHLRLALRMLAASGARAQ
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]