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The map label for this gene is yhhG [C]

Identifier: 220915644

GI number: 220915644

Start: 604417

End: 604836

Strand: Reverse

Name: yhhG [C]

Synonym: A2cp1_0525

Alternate gene names: 220915644

Gene position: 604836-604417 (Counterclockwise)

Preceding gene: 220915653

Following gene: 220915643

Centisome position: 12.03

GC content: 69.29

Gene sequence:

>420_bases
ATGCTGGAGCGCATCGGGATCTCGCTCGAGGACGGGCTGCTCGAGCAGTTCGACAAGCTCATCGCCGAGAAGGGCTACGT
CAACCGCTCGGAGGCGATCCGCGATCTCATCCGCGACGCGCTGGTGCAGCGCGCGTTCACCGAGTCCTCGGGGCGCGAGG
AGCGCGTGGCGGTGGTGACGCTGGTCTACGACCACGACTCGTCCAGCCTGGCGCAGAAGCTCGCGCACATCCAGCACGAG
AACCACCGGGCGGTGGTCTCGGCCCTGCACGTCCACATGGACCCGCACAACTGCCTCGAGGTGCTGGTGCTCCGCGGGCG
GGGCAAGGACGTGGTCGCGATGGGCGAGAGCCTGGTCGCGACCAGGGGCGTGAAGTACGGCAAGCTCGTGCCGGCCACCG
CCGGGCACGACCTCGGCTGA

Upstream 100 bases:

>100_bases
GCCTGGGAGGTAACACGGCCCGACGCCCGCGGCCCGCCCCGGCGCGGCGCAGTTGTGGGCGGGGCCGCCCTCCGGTAGCG
TCGGCGCGCACGGAGGCCAC

Downstream 100 bases:

>100_bases
AGGGCCCGCCGCGCGCTGCCTGCGTCGTCCCGTCCGGTTGACCCGGCCGCGGGACTCCAGTATCACGCCCCTCGGAATCG
TGCTACGCGCCCGCGCCCCC

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLERIGISLEDGLLEQFDKLIAEKGYVNRSEAIRDLIRDALVQRAFTESSGREERVAVVTLVYDHDSSSLAQKLAHIQHE
NHRAVVSALHVHMDPHNCLEVLVLRGRGKDVVAMGESLVATRGVKYGKLVPATAGHDLG

Sequences:

>Translated_139_residues
MLERIGISLEDGLLEQFDKLIAEKGYVNRSEAIRDLIRDALVQRAFTESSGREERVAVVTLVYDHDSSSLAQKLAHIQHE
NHRAVVSALHVHMDPHNCLEVLVLRGRGKDVVAMGESLVATRGVKYGKLVPATAGHDLG
>Mature_139_residues
MLERIGISLEDGLLEQFDKLIAEKGYVNRSEAIRDLIRDALVQRAFTESSGREERVAVVTLVYDHDSSSLAQKLAHIQHE
NHRAVVSALHVHMDPHNCLEVLVLRGRGKDVVAMGESLVATRGVKYGKLVPATAGHDLG

Specific function: Transcriptional regulator (Potential)

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family

Homologues:

Organism=Escherichia coli, GI1789892, Length=128, Percent_Identity=42.96875, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIKR_ANAD2 (B8JBW0)

Other databases:

- EMBL:   CP001359
- RefSeq:   YP_002490948.1
- ProteinModelPortal:   B8JBW0
- SMR:   B8JBW0
- GeneID:   7296804
- GenomeReviews:   CP001359_GR
- KEGG:   acp:A2cp1_0525
- HOGENOM:   HBG646378
- ProtClustDB:   PRK04460
- GO:   GO:0006350
- HAMAP:   MF_00476
- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864
- Gene3D:   G3DSA:1.10.1220.10
- Gene3D:   G3DSA:3.30.70.1150

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 15317; Mature: 15317

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERIGISLEDGLLEQFDKLIAEKGYVNRSEAIRDLIRDALVQRAFTESSGREERVAVVT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
LVYDHDSSSLAQKLAHIQHENHRAVVSALHVHMDPHNCLEVLVLRGRGKDVVAMGESLVA
EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
TRGVKYGKLVPATAGHDLG
HCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLERIGISLEDGLLEQFDKLIAEKGYVNRSEAIRDLIRDALVQRAFTESSGREERVAVVT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
LVYDHDSSSLAQKLAHIQHENHRAVVSALHVHMDPHNCLEVLVLRGRGKDVVAMGESLVA
EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
TRGVKYGKLVPATAGHDLG
HCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA