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The map label for this gene is hypC [H]

Identifier: 220915622

GI number: 220915622

Start: 577800

End: 578087

Strand: Reverse

Name: hypC [H]

Synonym: A2cp1_0503

Alternate gene names: 220915622

Gene position: 578087-577800 (Counterclockwise)

Preceding gene: 220915623

Following gene: 220915621

Centisome position: 11.49

GC content: 68.06

Gene sequence:

>288_bases
ATGTGCCTCGGGGTTCCAGGGAAGGTCATCGCCATCGACGGGCTCGACGCCACGGTGGACTTCTTCGGCGTGCGCAAGTC
GCTCCGCCTCGACATCGTGGACGAGCCGGTGCAGGTCGGCGACTACGTGCTCAACCACGTGGGCTTCGCCATCCGGCGCA
TCCCGCCGGAGGAGGTCCAGGAGACGCTGGCGCTGTTCGACCAGATCCTGGAGGTCTCCGGCGCGAAGGAGGACCTCATG
GCCGCCGACGTCCGGGGCGAGATGGCCGCCGGGAAGGACCAGAAGTAG

Upstream 100 bases:

>100_bases
CGAGGTGCCGCCCGGCGACGGCGGGATCGCGCTCGGCCAGGCGGTGGTCGCCGACGCGGTGGCCCGCGCCTAGCGCCGGC
CGCTGGAGGAGACGGAAGAC

Downstream 100 bases:

>100_bases
GGAGGCCCCGCGATGTCGAACGAGGATCTCTTCCGGCAGCTCAAGTTCCGCGATCCGGCCCGCGCCCGCGCGCTCGCCGA
GGCGCTCCGCCACAACATGG

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MCLGVPGKVIAIDGLDATVDFFGVRKSLRLDIVDEPVQVGDYVLNHVGFAIRRIPPEEVQETLALFDQILEVSGAKEDLM
AADVRGEMAAGKDQK

Sequences:

>Translated_95_residues
MCLGVPGKVIAIDGLDATVDFFGVRKSLRLDIVDEPVQVGDYVLNHVGFAIRRIPPEEVQETLALFDQILEVSGAKEDLM
AADVRGEMAAGKDQK
>Mature_95_residues
MCLGVPGKVIAIDGLDATVDFFGVRKSLRLDIVDEPVQVGDYVLNHVGFAIRRIPPEEVQETLALFDQILEVSGAKEDLM
AADVRGEMAAGKDQK

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10312; Mature: 10312

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGVPGKVIAIDGLDATVDFFGVRKSLRLDIVDEPVQVGDYVLNHVGFAIRRIPPEEVQ
CCCCCCCCEEEECCCCCHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
ETLALFDQILEVSGAKEDLMAADVRGEMAAGKDQK
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MCLGVPGKVIAIDGLDATVDFFGVRKSLRLDIVDEPVQVGDYVLNHVGFAIRRIPPEEVQ
CCCCCCCCEEEECCCCCHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
ETLALFDQILEVSGAKEDLMAADVRGEMAAGKDQK
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]