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The map label for this gene is hypA [H]

Identifier: 220915619

GI number: 220915619

Start: 575250

End: 575594

Strand: Reverse

Name: hypA [H]

Synonym: A2cp1_0500

Alternate gene names: 220915619

Gene position: 575594-575250 (Counterclockwise)

Preceding gene: 220915620

Following gene: 220915618

Centisome position: 11.44

GC content: 74.78

Gene sequence:

>345_bases
ATGCACGAGTATTCCCTGGTGGAGGCGCTGGTCCGGCGCGTGGAGCAGGAGGCGCGGCGGCGCGAGGCGCTCGCGATCCG
CGGGCTCACCGTGAGCGTGGGCGAGCTCTCCGGCGTGGACCCGGAGCTGTTCCGCACCGCCTACGAGACGTTCCGCGCCG
GCAGCCTGTGCGCAGACACCCCGCTCACCCTGAAGCGCCTGGAGGCGCGCTGGTCCTGCCCGGCCTGCCGCGCCCCCATC
GCGCGCGGCGCGGTCCTGCGCTGCCCGACCTGCGACGTCCCGGCCCGGCTCGACGAGGGCTCGGACGCGCTCACCCTCGA
CAGCATCGACATGGAGGTGCCCTGA

Upstream 100 bases:

>100_bases
GGCCCGGCGCGGTGATCCTCGACACCGGCTTCGGCAGGCGGATGCTGGCCGAGCCCGAGGGGGAGCTCCTGCCGCGCATC
TGCTAGGCAGGTCGAGCCGC

Downstream 100 bases:

>100_bases
TGTGCACGACCTGCGGCTGCGGTGACCCCGAGCTCGTCCCGGTGGAGCTGCACGAGAAGATCCTGGCCGGCAACGATCGC
GCCGCCCGCCACAACCGGGA

Product: hydrogenase expression/synthesis HypA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MHEYSLVEALVRRVEQEARRREALAIRGLTVSVGELSGVDPELFRTAYETFRAGSLCADTPLTLKRLEARWSCPACRAPI
ARGAVLRCPTCDVPARLDEGSDALTLDSIDMEVP

Sequences:

>Translated_114_residues
MHEYSLVEALVRRVEQEARRREALAIRGLTVSVGELSGVDPELFRTAYETFRAGSLCADTPLTLKRLEARWSCPACRAPI
ARGAVLRCPTCDVPARLDEGSDALTLDSIDMEVP
>Mature_114_residues
MHEYSLVEALVRRVEQEARRREALAIRGLTVSVGELSGVDPELFRTAYETFRAGSLCADTPLTLKRLEARWSCPACRAPI
ARGAVLRCPTCDVPARLDEGSDALTLDSIDMEVP

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688
- InterPro:   IPR020538 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 12560; Mature: 12560

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEYSLVEALVRRVEQEARRREALAIRGLTVSVGELSGVDPELFRTAYETFRAGSLCADT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
PLTLKRLEARWSCPACRAPIARGAVLRCPTCDVPARLDEGSDALTLDSIDMEVP
CHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MHEYSLVEALVRRVEQEARRREALAIRGLTVSVGELSGVDPELFRTAYETFRAGSLCADT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
PLTLKRLEARWSCPACRAPIARGAVLRCPTCDVPARLDEGSDALTLDSIDMEVP
CHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA