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The map label for this gene is 220915502

Identifier: 220915502

GI number: 220915502

Start: 427780

End: 428664

Strand: Reverse

Name: 220915502

Synonym: A2cp1_0383

Alternate gene names: NA

Gene position: 428664-427780 (Counterclockwise)

Preceding gene: 220915505

Following gene: 220915501

Centisome position: 8.52

GC content: 74.92

Gene sequence:

>885_bases
ATGACCGACGGAACGGAGACCTTCGAGACGCAACGTCCGGCCCTGCTCGCGCTCGCCTACCGGATGCTCGGGGAGCTGGC
GCGCGCCGAGGACGTGGTGCAGGAGGCGTGGCTCCGGTGGCAGCGGCGCCCGGACGAGGTCGGCTCCGCGAAGGCGTTCC
TGCTCACCACCGTCGCGCGCCTCTGCCTCGACGAGCTCGGCTCGGCGCGGGCGAGGCGGGAGGAGAGCCGCAGCGATCGG
CTGCCGGAGCCGGTGGACCTCGAGCGCGCGGGCCTCGGGCGCGTGGAGATGCTCGACCGGATCTCGATGGCGTTCCTGGT
CCTCCTGCAGCGCCTCACGCCCGCCGAGCGCGCCGTGCTGCTGCTGCACGACGTGTTCGACATGACCCACGCCGAGATCG
CGGCGCGGCTCGAGAGGAGCGAGCCGGCGTGCCGGCAGCTCCTCAGGCGGGCGAGGGAGAACGTCGCGACGGAGCGCCGC
ACGCTCCGGGCGTCGCGCGACGAGCACCGCCGGCTCCTGGCGGCGTTCATGGAGGCGAGCGCGCGTGGTGACCAGCGCGC
GCTGCTCGAGCTGCTCGCGGAGGACGCCGTCCTCATCGCCGACGCGGGTCCGGGCGTGGTGCGCTACGGACGCATCCGCA
ACATCGGACGGCCGGTGGTCGGCGGCGTGAAGGTGGCCGCGCTGCTCGCGTCCGTGGCGCGGCAGCGGGTCGGGGCGCCG
CTCGAGCTGCGCGAGCGCACGCTCAACGGGGAGCCGGCCGCGGTGGCGTTCGAGGACGGGCGTCCGGTGTCGGCCATCGT
GCTCGCGGTCGCCGGCGGCAAGGTACGGCACGTGTATCTCCAGGTGGACCCGGAGCGGCTCCGCCACGTCGGTCCGCTGG
CGTGA

Upstream 100 bases:

>100_bases
CGCCCGGTGATCCCGGGCGTTCTTTCGTGTGACGCCAGGGCGTCGAGATGCGCGCCGCCGCTGCGCGTCACGCTTCGCGC
GGCTACGTCGTCTGCCCGGG

Downstream 100 bases:

>100_bases
GCCCGCCGCGTCACGCTCCGCCGAGCCGCGTCGTCTCCTCGGCGAACCCCACCCTGGAGATCTGCCCCCGATGACGAGCA
CGACGACCCCGTCCACGACC

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Protein; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; Sigma Factor Sigma; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma Factor SigI; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Subunit; RNA Polymerase Sigma-70-Like Factor

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTDGTETFETQRPALLALAYRMLGELARAEDVVQEAWLRWQRRPDEVGSAKAFLLTTVARLCLDELGSARARREESRSDR
LPEPVDLERAGLGRVEMLDRISMAFLVLLQRLTPAERAVLLLHDVFDMTHAEIAARLERSEPACRQLLRRARENVATERR
TLRASRDEHRRLLAAFMEASARGDQRALLELLAEDAVLIADAGPGVVRYGRIRNIGRPVVGGVKVAALLASVARQRVGAP
LELRERTLNGEPAAVAFEDGRPVSAIVLAVAGGKVRHVYLQVDPERLRHVGPLA

Sequences:

>Translated_294_residues
MTDGTETFETQRPALLALAYRMLGELARAEDVVQEAWLRWQRRPDEVGSAKAFLLTTVARLCLDELGSARARREESRSDR
LPEPVDLERAGLGRVEMLDRISMAFLVLLQRLTPAERAVLLLHDVFDMTHAEIAARLERSEPACRQLLRRARENVATERR
TLRASRDEHRRLLAAFMEASARGDQRALLELLAEDAVLIADAGPGVVRYGRIRNIGRPVVGGVKVAALLASVARQRVGAP
LELRERTLNGEPAAVAFEDGRPVSAIVLAVAGGKVRHVYLQVDPERLRHVGPLA
>Mature_293_residues
TDGTETFETQRPALLALAYRMLGELARAEDVVQEAWLRWQRRPDEVGSAKAFLLTTVARLCLDELGSARARREESRSDRL
PEPVDLERAGLGRVEMLDRISMAFLVLLQRLTPAERAVLLLHDVFDMTHAEIAARLERSEPACRQLLRRARENVATERRT
LRASRDEHRRLLAAFMEASARGDQRALLELLAEDAVLIADAGPGVVRYGRIRNIGRPVVGGVKVAALLASVARQRVGAPL
ELRERTLNGEPAAVAFEDGRPVSAIVLAVAGGKVRHVYLQVDPERLRHVGPLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32617; Mature: 32486

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDGTETFETQRPALLALAYRMLGELARAEDVVQEAWLRWQRRPDEVGSAKAFLLTTVAR
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LCLDELGSARARREESRSDRLPEPVDLERAGLGRVEMLDRISMAFLVLLQRLTPAERAVL
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLHDVFDMTHAEIAARLERSEPACRQLLRRARENVATERRTLRASRDEHRRLLAAFMEAS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGDQRALLELLAEDAVLIADAGPGVVRYGRIRNIGRPVVGGVKVAALLASVARQRVGAP
CCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
LELRERTLNGEPAAVAFEDGRPVSAIVLAVAGGKVRHVYLQVDPERLRHVGPLA
HHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCEEEEEEEECHHHHHHCCCCC
>Mature Secondary Structure 
TDGTETFETQRPALLALAYRMLGELARAEDVVQEAWLRWQRRPDEVGSAKAFLLTTVAR
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LCLDELGSARARREESRSDRLPEPVDLERAGLGRVEMLDRISMAFLVLLQRLTPAERAVL
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLHDVFDMTHAEIAARLERSEPACRQLLRRARENVATERRTLRASRDEHRRLLAAFMEAS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGDQRALLELLAEDAVLIADAGPGVVRYGRIRNIGRPVVGGVKVAALLASVARQRVGAP
CCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
LELRERTLNGEPAAVAFEDGRPVSAIVLAVAGGKVRHVYLQVDPERLRHVGPLA
HHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCEEEEEEEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA