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The map label for this gene is 220915225

Identifier: 220915225

GI number: 220915225

Start: 116723

End: 117529

Strand: Reverse

Name: 220915225

Synonym: A2cp1_0104

Alternate gene names: NA

Gene position: 117529-116723 (Counterclockwise)

Preceding gene: 220915226

Following gene: 220915223

Centisome position: 2.34

GC content: 68.4

Gene sequence:

>807_bases
GTGCCCCATGGACTGTGGCCGCCGGCCGTGATCTTCTCGGGGCGTGAGCGAACACGACGCGCCGCGGGTGGTGAGGCCGG
TCCGAAATCAACTCTCGCTGCAGCCGACGGACCTCGAAGCGCTGGTCCCGGACGAGCACCCGGTTCGCGCCATCTGGACG
TTGGTCGAGCGGCTGGACCTGTCGGCGTTCTACGACGAGATCGCGTCGCGCGGCAGCAATGCTGGGCGGCCAGCGACGGA
CCCGGCGGTGCTGCTCGCGCTGTGGCTGTTCGCCAACTCGGAGGGCGTGGGGAGCGCGCGGTTGCTCGAGCGGCTGTGCG
AGCGGGACGCGCCCTACCGCTGGATCTGCGGCGGGGTGCCGGTGAACCACCATACGCTCGCCGACTTTCGCGTGGAGCAC
GGGAAGAAGCTCGACCGGCTCATGACGCAGGTGCTGGCCGCGCTCATGAAGGAAGGCGTGGTGCAGCTCCGGCGCGTGGC
GCAGGACGGGATGAAGGTCCGGGCGAGCGCCGGCGCGGCGAGCTTCCGGCGTCGTCAGTCACTGGAGCGCTGCCGCAAAG
AAGCCGAGGAACAGGTCCGAAAGCTCAGGCGCGAGATCGAGAGCGATCCGTCAGCTTCGACGAAGCGTGTTCAGGCTGCG
AAGGAGCGGGCCGCGCAAGCTCGGCTCGATGCCGTCGAGGCCGCACTTGCGGAGGTCGAAGTCGTCGAGAAGCAGCGCGT
CGAGCGAGACGAGAAGAAGCCCTCGTGCTGCTCGCCGCGATCAGCTTCAACATCATGCGTCTCATCGCGAGCAGACTCTC
GGCCTAA

Upstream 100 bases:

>100_bases
GACGAGCCGGAGACGGCCTGCATCCCCGCCGCGGCCGCCGCGCTCGAGGGCGAGCCGGTCCAGTCGGTCGAGCCCTGAGA
GAGCGTGAAGGAATCGGCCG

Downstream 100 bases:

>100_bases
TCGCCTCCGGACGGGACTCCCGGCGCCGGACCGAGCTCCGCCGGCTGAACGAGCCCTCCGACGCCCCCGCGTCCCCGAAG
GTGGGCGCGTCTCGACCCCG

Product: pseudouridine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPHGLWPPAVIFSGRERTRRAAGGEAGPKSTLAAADGPRSAGPGRAPGSRHLDVGRAAGPVGVLRRDRVARQQCWAASDG
PGGAARAVAVRQLGGRGERAVARAAVRAGRALPLDLRRGAGEPPYARRLSRGAREEARPAHDAGAGRAHEGRRGAAPARG
AGRDEGPGERRRGELPASSVTGALPQRSRGTGPKAQARDRERSVSFDEACSGCEGAGRASSARCRRGRTCGGRSRREAAR
RARREEALVLLAAISFNIMRLIASRLSA

Sequences:

>Translated_268_residues
MPHGLWPPAVIFSGRERTRRAAGGEAGPKSTLAAADGPRSAGPGRAPGSRHLDVGRAAGPVGVLRRDRVARQQCWAASDG
PGGAARAVAVRQLGGRGERAVARAAVRAGRALPLDLRRGAGEPPYARRLSRGAREEARPAHDAGAGRAHEGRRGAAPARG
AGRDEGPGERRRGELPASSVTGALPQRSRGTGPKAQARDRERSVSFDEACSGCEGAGRASSARCRRGRTCGGRSRREAAR
RARREEALVLLAAISFNIMRLIASRLSA
>Mature_267_residues
PHGLWPPAVIFSGRERTRRAAGGEAGPKSTLAAADGPRSAGPGRAPGSRHLDVGRAAGPVGVLRRDRVARQQCWAASDGP
GGAARAVAVRQLGGRGERAVARAAVRAGRALPLDLRRGAGEPPYARRLSRGAREEARPAHDAGAGRAHEGRRGAAPARGA
GRDEGPGERRRGELPASSVTGALPQRSRGTGPKAQARDRERSVSFDEACSGCEGAGRASSARCRRGRTCGGRSRREAARR
ARREEALVLLAAISFNIMRLIASRLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27965; Mature: 27834

Theoretical pI: Translated: 12.32; Mature: 12.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHGLWPPAVIFSGRERTRRAAGGEAGPKSTLAAADGPRSAGPGRAPGSRHLDVGRAAGP
CCCCCCCHHHEECCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
VGVLRRDRVARQQCWAASDGPGGAARAVAVRQLGGRGERAVARAAVRAGRALPLDLRRGA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCC
GEPPYARRLSRGAREEARPAHDAGAGRAHEGRRGAAPARGAGRDEGPGERRRGELPASSV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHH
TGALPQRSRGTGPKAQARDRERSVSFDEACSGCEGAGRASSARCRRGRTCGGRSRREAAR
HCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHH
RARREEALVLLAAISFNIMRLIASRLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PHGLWPPAVIFSGRERTRRAAGGEAGPKSTLAAADGPRSAGPGRAPGSRHLDVGRAAGP
CCCCCCHHHEECCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
VGVLRRDRVARQQCWAASDGPGGAARAVAVRQLGGRGERAVARAAVRAGRALPLDLRRGA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCC
GEPPYARRLSRGAREEARPAHDAGAGRAHEGRRGAAPARGAGRDEGPGERRRGELPASSV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHH
TGALPQRSRGTGPKAQARDRERSVSFDEACSGCEGAGRASSARCRRGRTCGGRSRREAAR
HCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHH
RARREEALVLLAAISFNIMRLIASRLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA