Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is yeaO [C]
Identifier: 220905487
GI number: 220905487
Start: 2683026
End: 2683379
Strand: Reverse
Name: yeaO [C]
Synonym: Ddes_2225
Alternate gene names: 220905487
Gene position: 2683379-2683026 (Counterclockwise)
Preceding gene: 220905488
Following gene: 220905486
Centisome position: 93.39
GC content: 57.06
Gene sequence:
>354_bases ATGAGCATTATTCTGCACCGCGTATATGAGCACTGCCTGCCCGATGCCGACGTGCGTATTCTGGTTGACCGAATCTGGCC GAGAGGCATTGCAAAGGCCGCTGCCAGCTGGGACGTGTGGCTGAAGGATATTGCCCCGTCCAGTGAGCTGCGCAAATGGT TTGCCCACGACAGGGGAAAATGGAACGAATTCCAGAAGCGCTATACTGCGGAGCTTGACGCTTCCGGAGCGCCGCTCGTC AGGCTGCGGGAGCTTCTTGCGGCTCACGGCACGGCAGTATTTCTGTATGCGGCGAAAGATCAGGATTGCAATAATGCCGT GGCCCTGAAAAACTATCTGGAATCCCGGCCGTAG
Upstream 100 bases:
>100_bases GACCAGTGCGGGTGCTCCGGGCCGTGCAAAGGCCGCCGCTGCGATGGTGCTGCAATTTTTACGGCTCGCCGCCGTTTCGC CCGAAAAAGGGAGGTCTGTG
Downstream 100 bases:
>100_bases CGGCATGCTGCGTCGGCTCACAGTTGATAGCACGATGTTTTTCGGCCGGTTTCTGCATGACAGACCACTCACCCGGGCTG GCCGTTACCCTGCCGGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSIILHRVYEHCLPDADVRILVDRIWPRGIAKAAASWDVWLKDIAPSSELRKWFAHDRGKWNEFQKRYTAELDASGAPLV RLRELLAAHGTAVFLYAAKDQDCNNAVALKNYLESRP
Sequences:
>Translated_117_residues MSIILHRVYEHCLPDADVRILVDRIWPRGIAKAAASWDVWLKDIAPSSELRKWFAHDRGKWNEFQKRYTAELDASGAPLV RLRELLAAHGTAVFLYAAKDQDCNNAVALKNYLESRP >Mature_116_residues SIILHRVYEHCLPDADVRILVDRIWPRGIAKAAASWDVWLKDIAPSSELRKWFAHDRGKWNEFQKRYTAELDASGAPLVR LRELLAAHGTAVFLYAAKDQDCNNAVALKNYLESRP
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yeaO [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=115, Percent_Identity=39.1304347826087, Blast_Score=74, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: NA
Molecular weight: Translated: 13402; Mature: 13271
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIILHRVYEHCLPDADVRILVDRIWPRGIAKAAASWDVWLKDIAPSSELRKWFAHDRGK CHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC WNEFQKRYTAELDASGAPLVRLRELLAAHGTAVFLYAAKDQDCNNAVALKNYLESRP HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SIILHRVYEHCLPDADVRILVDRIWPRGIAKAAASWDVWLKDIAPSSELRKWFAHDRGK HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC WNEFQKRYTAELDASGAPLVRLRELLAAHGTAVFLYAAKDQDCNNAVALKNYLESRP HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]