Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
---|---|
Accession | NC_011883 |
Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220905397
Identifier: 220905397
GI number: 220905397
Start: 2572035
End: 2572610
Strand: Reverse
Name: 220905397
Synonym: Ddes_2135
Alternate gene names: NA
Gene position: 2572610-2572035 (Counterclockwise)
Preceding gene: 220905398
Following gene: 220905395
Centisome position: 89.53
GC content: 57.64
Gene sequence:
>576_bases ATGACCGTAAAGGAAAAGATTGTGGCTCAGGGCGCGCTGTTGTGGCGTTTTCTGGGTTTTTTCCAGCCGCCCCTGTTGCG CTGTATCCATGCCGCCGTGATCGCATTTGTACTTTTGCAGTTCCTGACCAGCATGGTCATGATGGTGACTGTGGAAGGCC CCTCGGGCCTGGCCTGGATACACATCATCTCAGGCATGGCCCTGTGCCTGCTGGGTATCGCCCTTGTGACGCTCAGCATC AGAAAGCGCGGCTTGCGCAACTTTTTCCCCTACCTGTGGGGCGATATGGAGCAGCTTGGCAAGGATATGCGCGCTGCGGC ACAGTTCAAGATGGTTGGTCCCCGCCCCAAAGGCCTGCCCGCATGTATCCAGGGCCTTGGCATGGGAGCGCTGCTGCTGG CTGTGTTTACCGGCCTGTGGTGGTTTGACGACTGGAGCAATGACCGCCTTGGTCTTACCGCCCTGAGCGTACACAAGTTT TTTGCCTGGGCTATGGTTGCCTATCTTGCAGGACACGGCGGCATGGCGCTGGCCCATTTTGCCATATGGCAGAAAAAGAC GGCGCCCAAGAAATAG
Upstream 100 bases:
>100_bases GAAATCGCCCTAAAAAAACAGGACCGCCCTTTGACCCCGGCGTGCCGCCCTGATGCTCAGGGCGGCACGGGGCAGCGGTT CATACTTCAGGGAGTACTGC
Downstream 100 bases:
>100_bases CGCTTAGCGCACGTTGGCAAGAATAGAGCGCATTTTATGCGTGAAATGCTTTGTGGGGGAGGGAACCTTTTACAAAAGGT TCCCTCCCCCACGTCCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTVKEKIVAQGALLWRFLGFFQPPLLRCIHAAVIAFVLLQFLTSMVMMVTVEGPSGLAWIHIISGMALCLLGIALVTLSI RKRGLRNFFPYLWGDMEQLGKDMRAAAQFKMVGPRPKGLPACIQGLGMGALLLAVFTGLWWFDDWSNDRLGLTALSVHKF FAWAMVAYLAGHGGMALAHFAIWQKKTAPKK
Sequences:
>Translated_191_residues MTVKEKIVAQGALLWRFLGFFQPPLLRCIHAAVIAFVLLQFLTSMVMMVTVEGPSGLAWIHIISGMALCLLGIALVTLSI RKRGLRNFFPYLWGDMEQLGKDMRAAAQFKMVGPRPKGLPACIQGLGMGALLLAVFTGLWWFDDWSNDRLGLTALSVHKF FAWAMVAYLAGHGGMALAHFAIWQKKTAPKK >Mature_190_residues TVKEKIVAQGALLWRFLGFFQPPLLRCIHAAVIAFVLLQFLTSMVMMVTVEGPSGLAWIHIISGMALCLLGIALVTLSIR KRGLRNFFPYLWGDMEQLGKDMRAAAQFKMVGPRPKGLPACIQGLGMGALLLAVFTGLWWFDDWSNDRLGLTALSVHKFF AWAMVAYLAGHGGMALAHFAIWQKKTAPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21149; Mature: 21018
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKEKIVAQGALLWRFLGFFQPPLLRCIHAAVIAFVLLQFLTSMVMMVTVEGPSGLAWI CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HIISGMALCLLGIALVTLSIRKRGLRNFFPYLWGDMEQLGKDMRAAAQFKMVGPRPKGLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCH ACIQGLGMGALLLAVFTGLWWFDDWSNDRLGLTALSVHKFFAWAMVAYLAGHGGMALAHF HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIWQKKTAPKK HHHHHCCCCCC >Mature Secondary Structure TVKEKIVAQGALLWRFLGFFQPPLLRCIHAAVIAFVLLQFLTSMVMMVTVEGPSGLAWI CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HIISGMALCLLGIALVTLSIRKRGLRNFFPYLWGDMEQLGKDMRAAAQFKMVGPRPKGLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCH ACIQGLGMGALLLAVFTGLWWFDDWSNDRLGLTALSVHKFFAWAMVAYLAGHGGMALAHF HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIWQKKTAPKK HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA