Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is flgI
Identifier: 220905266
GI number: 220905266
Start: 2417285
End: 2418397
Strand: Reverse
Name: flgI
Synonym: Ddes_2004
Alternate gene names: 220905266
Gene position: 2418397-2417285 (Counterclockwise)
Preceding gene: 220905267
Following gene: 220905265
Centisome position: 84.16
GC content: 60.47
Gene sequence:
>1113_bases ATGAAATTGACGATTTTGCGCCATCCCGTTTTATGGATATTTACGGCGGCCCTGCTGCTGAGCATGGTCTTGCCCGCGCA GGCCGTGCGCATCAAGGATATAGCCTCTTTTTCTGGTGTGCGTGACAACCAGCTTATCGGTTACGGCCTTGTGGTGGGGC TGGCAGGCACGGGAGACAAGAAGGATGCGGTTTTTACCCTGAGTTCCATGAAAAACATGATGGACCGCATGGGTATCGGC GTGGATTCTTCGGCGCTCAAGACCAAAAACGTGGCCTCTGTGATGGTGACGGCCCGCATGCCTGTATCCGCCAAGCCGGG TACGCGCCTTGACGTCACCGTGTCTTCTGTGGGCGACGCCACATCGCTTTTGGGCGGCGTGCTGCTGCAAACGGCCCTCA AGGGCGTGGACGGCAAGATATACACCCTCGCCCAGGGGTCGCTGACCGTGGGCGGGTTTTCCAGTCAGGGCAGGGCGGCC AGCGTCAGCAAGAACATTTCCACCGTGGGCATTATTCCCGGCGGGGGCATTGTGGAGCGGGGCATTCCGTTTGAGTTCAA CCAGCAGGACAAACTCACCCTGCATCTGCGCACGGCCGACTTCAGCACGGCCCAGCAGATCGCCGAGCGCGTCAACGGCG CCATGGGCGGTCCCTTTGCCCGCGCCATAGACGACATGTCCATCACTATGGACATCCCGGCGCAGTACCGCAACAACATG GTGCCTCTCATGGCCTCCATCGAAAATCTGGACGTAAGCCCCGACACCGCGGCCAAGGTGGTGGTGGACGAAAAAACCGG CACTGTGGTGCTTGGGCGTGATGTGCGCATTACCCGCACCGCCGTGGCGCACGGTAATTTGCAGATCACCGTGCAGGAGG GCGAGCAGGTATCGCAGCCCGGTCCCTTCTCGCAGGGGCAGACCGTGGTGACGCCTACCACGGAAACCAATGTGCGCGAA GAAAACCGCCATCTCGTCATCATCGAAGGGGCCACCCTGCAGGAACTGGTGGACGGTCTCAACTCCATCGGGGCCACCCC GCGCGACCTCATATCCATTCTGCGCACCATGCAGGTTTCCGGTGCGCTGCTGGCGGAACTGGAGGTGATATAA
Upstream 100 bases:
>100_bases GCCCTGTCTTTTCCCAACTCCTCACAGCGCCCCGTTTGTCATTTTCGGCACGCTTTCTGCAATGACGGCTGTGCCGGTAT TCCGGCAAGGAGACAGCGCC
Downstream 100 bases:
>100_bases ATGACCTCTCCCCTGACCACCGGCCTTGTGCCGCATGAAGCTGGAGCGGCGGAAGTATCGCGCCGTGAGTTCCAGTCCCG CCTGGCGGGCATTGGCAATC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKLTILRHPVLWIFTAALLLSMVLPAQAVRIKDIASFSGVRDNQLIGYGLVVGLAGTGDKKDAVFTLSSMKNMMDRMGIG VDSSALKTKNVASVMVTARMPVSAKPGTRLDVTVSSVGDATSLLGGVLLQTALKGVDGKIYTLAQGSLTVGGFSSQGRAA SVSKNISTVGIIPGGGIVERGIPFEFNQQDKLTLHLRTADFSTAQQIAERVNGAMGGPFARAIDDMSITMDIPAQYRNNM VPLMASIENLDVSPDTAAKVVVDEKTGTVVLGRDVRITRTAVAHGNLQITVQEGEQVSQPGPFSQGQTVVTPTTETNVRE ENRHLVIIEGATLQELVDGLNSIGATPRDLISILRTMQVSGALLAELEVI
Sequences:
>Translated_370_residues MKLTILRHPVLWIFTAALLLSMVLPAQAVRIKDIASFSGVRDNQLIGYGLVVGLAGTGDKKDAVFTLSSMKNMMDRMGIG VDSSALKTKNVASVMVTARMPVSAKPGTRLDVTVSSVGDATSLLGGVLLQTALKGVDGKIYTLAQGSLTVGGFSSQGRAA SVSKNISTVGIIPGGGIVERGIPFEFNQQDKLTLHLRTADFSTAQQIAERVNGAMGGPFARAIDDMSITMDIPAQYRNNM VPLMASIENLDVSPDTAAKVVVDEKTGTVVLGRDVRITRTAVAHGNLQITVQEGEQVSQPGPFSQGQTVVTPTTETNVRE ENRHLVIIEGATLQELVDGLNSIGATPRDLISILRTMQVSGALLAELEVI >Mature_370_residues MKLTILRHPVLWIFTAALLLSMVLPAQAVRIKDIASFSGVRDNQLIGYGLVVGLAGTGDKKDAVFTLSSMKNMMDRMGIG VDSSALKTKNVASVMVTARMPVSAKPGTRLDVTVSSVGDATSLLGGVLLQTALKGVDGKIYTLAQGSLTVGGFSSQGRAA SVSKNISTVGIIPGGGIVERGIPFEFNQQDKLTLHLRTADFSTAQQIAERVNGAMGGPFARAIDDMSITMDIPAQYRNNM VPLMASIENLDVSPDTAAKVVVDEKTGTVVLGRDVRITRTAVAHGNLQITVQEGEQVSQPGPFSQGQTVVTPTTETNVRE ENRHLVIIEGATLQELVDGLNSIGATPRDLISILRTMQVSGALLAELEVI
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=367, Percent_Identity=43.8692098092643, Blast_Score=258, Evalue=5e-70,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_DESDA (B8J2Y1)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002480578.1 - GeneID: 7285720 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_2004 - HOGENOM: HBG321070 - ProtClustDB: PRK05303 - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 39107; Mature: 39107
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTILRHPVLWIFTAALLLSMVLPAQAVRIKDIASFSGVRDNQLIGYGLVVGLAGTGDK CEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCC KDAVFTLSSMKNMMDRMGIGVDSSALKTKNVASVMVTARMPVSAKPGTRLDVTVSSVGDA CCCEEEHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCH TSLLGGVLLQTALKGVDGKIYTLAQGSLTVGGFSSQGRAASVSKNISTVGIIPGGGIVER HHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCEEECCCCCEEEEEECCCCEECC GIPFEFNQQDKLTLHLRTADFSTAQQIAERVNGAMGGPFARAIDDMSITMDIPAQYRNNM CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCHHHHCCE VPLMASIENLDVSPDTAAKVVVDEKTGTVVLGRDVRITRTAVAHGNLQITVQEGEQVSQP EEEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCCCC GPFSQGQTVVTPTTETNVREENRHLVIIEGATLQELVDGLNSIGATPRDLISILRTMQVS CCCCCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC GALLAELEVI CCEEEEEECC >Mature Secondary Structure MKLTILRHPVLWIFTAALLLSMVLPAQAVRIKDIASFSGVRDNQLIGYGLVVGLAGTGDK CEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCC KDAVFTLSSMKNMMDRMGIGVDSSALKTKNVASVMVTARMPVSAKPGTRLDVTVSSVGDA CCCEEEHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCH TSLLGGVLLQTALKGVDGKIYTLAQGSLTVGGFSSQGRAASVSKNISTVGIIPGGGIVER HHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCEEECCCCCEEEEEECCCCEECC GIPFEFNQQDKLTLHLRTADFSTAQQIAERVNGAMGGPFARAIDDMSITMDIPAQYRNNM CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCHHHHCCE VPLMASIENLDVSPDTAAKVVVDEKTGTVVLGRDVRITRTAVAHGNLQITVQEGEQVSQP EEEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCCCC GPFSQGQTVVTPTTETNVREENRHLVIIEGATLQELVDGLNSIGATPRDLISILRTMQVS CCCCCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC GALLAELEVI CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA