| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904837
Identifier: 220904837
GI number: 220904837
Start: 1890232
End: 1892154
Strand: Reverse
Name: 220904837
Synonym: Ddes_1570
Alternate gene names: NA
Gene position: 1892154-1890232 (Counterclockwise)
Preceding gene: 220904838
Following gene: 220904836
Centisome position: 65.85
GC content: 63.44
Gene sequence:
>1923_bases ATGGCGTCAGATCAGTTGCGCAAAAAATGGGGTACTGTCTTCATGGGTGAGCGCGAAGCCACCGTGGAGCAGCTTGACGC CATGCAGGAACCCCTGCGCCGTGAGCGTGCGCAACAGCAGGAACAGGAAGATTATTTTGCGCGGGTGCGGGCCAAGGCCG AGGAAAGGGCGCGTGAAATACTGGGGGCAGCCTACGCCGAACGCCAAAGGGTGCTCGACGAGGCGCGCGCCGAGGCGCAG GACCTGAAGCAGCGGCTCATTGGCGACAGCGAAACACTCAAGGCCCAGGCGCAGGAAGAAAGAAATCAGGCCGGAGCCGA GCTGGGCAAGGCGCAAGCGCTGCGAGAGCAGGCGCAAGCCGTGCTCGACGCAGCCCATGGCGAGGGATTTCAGACAGGTA TGGACCAGGCCGGGCAGGAGCTTAAAGAGTTTCGCGCCGAAATGGGGCAGGCGCTCGGCAGCGTGCTTTACGCGCTGGAT GCCCAGCGCCGCAACATATGCGACGCCTGGCGTGAAGAACTTGCCCTGCTGACGCAGGAGGCCGTTACGGCAGGTACGGG CTGGGTGCTGGAAGAAGAGCATAAACGCATCTTGCAGGCCCTGGTCTTTGAGGCGCTCAACCTGTTGGAAGACCGCGCCT CCATCACCGTACGCGTGCATCCCGATGACGAAGGCACCGTAGGTGACATGTTCATGGCTGCCCGTGAGCGTGTGCCCGAG TTGCAGCAATGGGTCGTCAACGGCGATGAGTCTGTTGAACGTGGCGGGCTGGTGGCTGAAAGCGTCAGCGGCAGCGTAGA CTGTCGCCGGGAACATTACGCAGAACTGGTCAACGGTATTTTATCCCATCTGACCCTCGGGCCTGACCGGAAAGAAGAAA GCGATGGAGAGGCCGTCAGCCGGATGGTGCAGCAAGAGGCCGAGCGCATAGCCGCTATGGCTCCCGCGCCGGAATATCCT GCCGCGTCCGCCGGTCAGACAGACCTGATCCCGCAGGCGGCGCAGGAAAACGCCCCGGCAAAAGAGGCGGCTCAGGCTTC ATACGAAGGCTCACACGAGACGTTATCGTCTGAAGCGGCCGATCCTCTGAATGCAGGATTGCCGGCAGACATCTCCGGTG ATGTTTCCAGCGGTATGGGGGCTGACCATTCCGGTGAGGAGTCTGAACATTCCCATGCGGCGGATGAGCCTGCGCTGGCG GCGGACCCTGAAGGGGCCGTGCCCGGCAGCCGGGCCATGCTGGCGGAAGACGACGGCACGCAGGCAGACCTTGCCGCTGC TGCCCCGGAAGATGCCTATATACAGAACGCCGCCGGCGCCACTGCTGGGGGTGCGGGCATGCCTGGTACGGAGGCTACAG CCCCTGCTGCGACAGCCTCGGAGCACGGAGGTTTCGTTCATGCTCCGGAGTCGGGCGACCCCGCCCGGTCTCCGGCGGCC GAAGCGGCTGCCGGTGAATACGGCATGCCTGACACGCCCGCCTCCGCTCCGGAAGGCACACCGTCAGCCCCGGGTGGGAT TGACGCAGAAACATATACGGAACACCAGAAGACTCCGGCGATGGACGCTTTTTCGGAGAAAATTCCGGCGGGCGAAGCAC CTGGAGCCGCTCCCGCAGCGCTGCCAGACATGCCTGCAGGGCATGAATCCGCGGGTAAAACCAACGGCATGGGCAATCAC GGCGCACAATCTGCTGGCGTTGCGCCGCAGACTGTCAATCCTGCCGTCGCACAGCCTGGAGCGCGTCCGGCAAATCCCAC GCTGGCGGAGCTGGAAGACGAGCTTTTTCCGCTTGATGACGAAGAGGGTGGTGCGGTTTCCGGCCAGCCAGGCCAATCAG GTCAGTCAGGCCAGTCAGGTCTGGCCGATCATGATGTTTTTTCCCAGGGCGGTTTCCTGCCCGGCGCGGGTAAAGGCCGC TGA
Upstream 100 bases:
>100_bases GCGGCAGGTGCCCCGTATCCAGGGGTAACAGCCTTGCTGTGCCGGCTGGTCTGGTGGCCGCTGCAGACCTGCACTGAAAA ATTCTAACCCGGAAAACGTC
Downstream 100 bases:
>100_bases CAGCATGGTTGTGTTATGAAGCTGGACCCGCAAGCCTGCATCAAATTACTGCAAACAAGCAATCCCGTGCGTCTGTACGG CAAGGTCAACAAGGTCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Flagellar Biosynthesis/Type III Secretory Pathway Protein
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MASDQLRKKWGTVFMGEREATVEQLDAMQEPLRRERAQQQEQEDYFARVRAKAEERAREILGAAYAERQRVLDEARAEAQ DLKQRLIGDSETLKAQAQEERNQAGAELGKAQALREQAQAVLDAAHGEGFQTGMDQAGQELKEFRAEMGQALGSVLYALD AQRRNICDAWREELALLTQEAVTAGTGWVLEEEHKRILQALVFEALNLLEDRASITVRVHPDDEGTVGDMFMAARERVPE LQQWVVNGDESVERGGLVAESVSGSVDCRREHYAELVNGILSHLTLGPDRKEESDGEAVSRMVQQEAERIAAMAPAPEYP AASAGQTDLIPQAAQENAPAKEAAQASYEGSHETLSSEAADPLNAGLPADISGDVSSGMGADHSGEESEHSHAADEPALA ADPEGAVPGSRAMLAEDDGTQADLAAAAPEDAYIQNAAGATAGGAGMPGTEATAPAATASEHGGFVHAPESGDPARSPAA EAAAGEYGMPDTPASAPEGTPSAPGGIDAETYTEHQKTPAMDAFSEKIPAGEAPGAAPAALPDMPAGHESAGKTNGMGNH GAQSAGVAPQTVNPAVAQPGARPANPTLAELEDELFPLDDEEGGAVSGQPGQSGQSGQSGLADHDVFSQGGFLPGAGKGR
Sequences:
>Translated_640_residues MASDQLRKKWGTVFMGEREATVEQLDAMQEPLRRERAQQQEQEDYFARVRAKAEERAREILGAAYAERQRVLDEARAEAQ DLKQRLIGDSETLKAQAQEERNQAGAELGKAQALREQAQAVLDAAHGEGFQTGMDQAGQELKEFRAEMGQALGSVLYALD AQRRNICDAWREELALLTQEAVTAGTGWVLEEEHKRILQALVFEALNLLEDRASITVRVHPDDEGTVGDMFMAARERVPE LQQWVVNGDESVERGGLVAESVSGSVDCRREHYAELVNGILSHLTLGPDRKEESDGEAVSRMVQQEAERIAAMAPAPEYP AASAGQTDLIPQAAQENAPAKEAAQASYEGSHETLSSEAADPLNAGLPADISGDVSSGMGADHSGEESEHSHAADEPALA ADPEGAVPGSRAMLAEDDGTQADLAAAAPEDAYIQNAAGATAGGAGMPGTEATAPAATASEHGGFVHAPESGDPARSPAA EAAAGEYGMPDTPASAPEGTPSAPGGIDAETYTEHQKTPAMDAFSEKIPAGEAPGAAPAALPDMPAGHESAGKTNGMGNH GAQSAGVAPQTVNPAVAQPGARPANPTLAELEDELFPLDDEEGGAVSGQPGQSGQSGQSGLADHDVFSQGGFLPGAGKGR >Mature_639_residues ASDQLRKKWGTVFMGEREATVEQLDAMQEPLRRERAQQQEQEDYFARVRAKAEERAREILGAAYAERQRVLDEARAEAQD LKQRLIGDSETLKAQAQEERNQAGAELGKAQALREQAQAVLDAAHGEGFQTGMDQAGQELKEFRAEMGQALGSVLYALDA QRRNICDAWREELALLTQEAVTAGTGWVLEEEHKRILQALVFEALNLLEDRASITVRVHPDDEGTVGDMFMAARERVPEL QQWVVNGDESVERGGLVAESVSGSVDCRREHYAELVNGILSHLTLGPDRKEESDGEAVSRMVQQEAERIAAMAPAPEYPA ASAGQTDLIPQAAQENAPAKEAAQASYEGSHETLSSEAADPLNAGLPADISGDVSSGMGADHSGEESEHSHAADEPALAA DPEGAVPGSRAMLAEDDGTQADLAAAAPEDAYIQNAAGATAGGAGMPGTEATAPAATASEHGGFVHAPESGDPARSPAAE AAAGEYGMPDTPASAPEGTPSAPGGIDAETYTEHQKTPAMDAFSEKIPAGEAPGAAPAALPDMPAGHESAGKTNGMGNHG AQSAGVAPQTVNPAVAQPGARPANPTLAELEDELFPLDDEEGGAVSGQPGQSGQSGQSGLADHDVFSQGGFLPGAGKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66753; Mature: 66622
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDQLRKKWGTVFMGEREATVEQLDAMQEPLRRERAQQQEQEDYFARVRAKAEERAREI CCCHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAAYAERQRVLDEARAEAQDLKQRLIGDSETLKAQAQEERNQAGAELGKAQALREQAQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDAAHGEGFQTGMDQAGQELKEFRAEMGQALGSVLYALDAQRRNICDAWREELALLTQE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTAGTGWVLEEEHKRILQALVFEALNLLEDRASITVRVHPDDEGTVGDMFMAARERVPE HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH LQQWVVNGDESVERGGLVAESVSGSVDCRREHYAELVNGILSHLTLGPDRKEESDGEAVS HHHHHHCCCHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RMVQQEAERIAAMAPAPEYPAASAGQTDLIPQAAQENAPAKEAAQASYEGSHETLSSEAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHCC DPLNAGLPADISGDVSSGMGADHSGEESEHSHAADEPALAADPEGAVPGSRAMLAEDDGT CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC QADLAAAAPEDAYIQNAAGATAGGAGMPGTEATAPAATASEHGGFVHAPESGDPARSPAA HHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCHH EAAAGEYGMPDTPASAPEGTPSAPGGIDAETYTEHQKTPAMDAFSEKIPAGEAPGAAPAA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC LPDMPAGHESAGKTNGMGNHGAQSAGVAPQTVNPAVAQPGARPANPTLAELEDELFPLDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCC EEGGAVSGQPGQSGQSGQSGLADHDVFSQGGFLPGAGKGR CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ASDQLRKKWGTVFMGEREATVEQLDAMQEPLRRERAQQQEQEDYFARVRAKAEERAREI CCHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAAYAERQRVLDEARAEAQDLKQRLIGDSETLKAQAQEERNQAGAELGKAQALREQAQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDAAHGEGFQTGMDQAGQELKEFRAEMGQALGSVLYALDAQRRNICDAWREELALLTQE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTAGTGWVLEEEHKRILQALVFEALNLLEDRASITVRVHPDDEGTVGDMFMAARERVPE HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH LQQWVVNGDESVERGGLVAESVSGSVDCRREHYAELVNGILSHLTLGPDRKEESDGEAVS HHHHHHCCCHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RMVQQEAERIAAMAPAPEYPAASAGQTDLIPQAAQENAPAKEAAQASYEGSHETLSSEAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHCC DPLNAGLPADISGDVSSGMGADHSGEESEHSHAADEPALAADPEGAVPGSRAMLAEDDGT CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC QADLAAAAPEDAYIQNAAGATAGGAGMPGTEATAPAATASEHGGFVHAPESGDPARSPAA HHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCHH EAAAGEYGMPDTPASAPEGTPSAPGGIDAETYTEHQKTPAMDAFSEKIPAGEAPGAAPAA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC LPDMPAGHESAGKTNGMGNHGAQSAGVAPQTVNPAVAQPGARPANPTLAELEDELFPLDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCC EEGGAVSGQPGQSGQSGQSGLADHDVFSQGGFLPGAGKGR CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA