| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ppsA [H]
Identifier: 220904832
GI number: 220904832
Start: 1880689
End: 1883304
Strand: Reverse
Name: ppsA [H]
Synonym: Ddes_1565
Alternate gene names: 220904832
Gene position: 1883304-1880689 (Counterclockwise)
Preceding gene: 220904833
Following gene: 220904831
Centisome position: 65.54
GC content: 60.7
Gene sequence:
>2616_bases ATGGCGCTCCTCAAATATTTGCGGCACTGGATAGGGCGGGACCAGCCCGGGGAGCCAGACCCTGAGGAACTGGCCCGGGA GGAAGAGCTGAAGATGCGCCTGCGTGAGCGTTGCGCGCGCTTCCGCCGTCTGCTTTCTGCCAACAAGCGCGCCCTTGAAG CCATGAGCGAGGTGGAAGACCGCCTGAACGGCGCAAAACCTTTCGGCATGGATTATGTGCATGCCGTCAGCACTCGGGCC GTTACCGCTGTTTTTCAGATGGTGCGCGAACTGAACGCTCTTTCCGGCAACGCCTATGCCGGGCTGCTTGAGCCTTTCGG CCGTATCCGCGGCCAGATGGAAGCTCTGCTGGAAGAACCTCCACATCAGGACGGCCCCCTTATCCTGCATCTTGACCAGA TAAGCCTGAGTGACCTCACTCTTGTGGGGGGCAAAATGGCAAATCTGGGCGAAGTGGCCGCCAATGCCGGCCTTTCCGTG CCTGACGGCTTTGCCGTGACAGTCAGCGCCTACTATCGTTTTATGGAATATAACGGCCTGCAGAGTGAGCTGAACCGGCT TATTCAGGCCACAGACATGCAGAGCCTTGATCAGGTCTTCAGTCTGGCTGCCGCCCTGCAAAAGGCCGTACTCACGGCGC CGCTGCCCCCCGAACTTGAAAATGCCATTACTGAAGCTGTGGCTATCATGCGTGCCAAGGCTGGTCCCGGTCTCAAGCTG GCCCTGCGCAGCAGCGCGGTGGGCGAAGACTCTCTTGGTGTTACCTTTGCGGGCCAGTACAGGTCGGAACTCAACGTGCC TCCTGAAGAAGCCTGCGAAGTATGGAAAGAGATCATTGCCAGCAAGTATGCAGTCACTGCCATGAGCTACCGCTACCATC ATGGCATTCCCGATGATGCCGCGCCCATGTGCGTGGGGGTTCTGGCAATGGTCCCCGCTGCAGCGGGCGGGGTGGCATAC AGCCGTGATCCCGTGGCCGCCAGTCGCGGCCGTGAACAGATACTGCTCAATGCGGTGGCCGGCCTGCCTCAGGCTGTGGT GGACGGGGCAGTAACGCCTGACGTGTATGTTTTCAGCCGGGAAATCCCCCCCAAGTTTATCCGTAAACGTCTGGCCGGTC CCGAGGGTACCCCCCCAAGCCTTACCGACAGTCAGGCTGCGGAGCTTGCCAAGGTGGCCCTTGCGCTGGAGAGTTATTAT ACTGAGCCGCAGGATGTGGAGTGGGCGCTTGACGCGGAAGACGGCCGCATTGTCGTTTTGCAGAGCCGCCCCCTGCACGA GGCCGATTCCGCTACGGAGCAGAGCCATGCGGAGCCGCAGCGCACCGGAGAGCAGGGCGGCGAAGCCTTTGCCCTGGACG ACCTGCCCTCCGGCCTGCAGGTGCTTGCGGCGGGGGGCGTGGCCGTAAGTCCCGGCGTGGGCATAGGCCCTGCCTTTGTG GCCCGCAAAGAGGCGGACATGCTCTCGTTTCCCAAGGGCGGCATTCTGGTGGTGGAACGTGCCTTGCCCCGTTGGGCACC CCTGCTTTCACGGGCTTCGGGCCTTGTCAGCGAAGCCGGGGGCATGGCCGGGCATCTGGCCTCGGTGGCGCGCGAATACC GTTTGCCCGCACTCTTCAGCCTGCCTGATGCCCGCCTGTTGTTGGACAATACCGGAGAAGTCACGCTGGATGCGGCCCGC TGCGCCGTCTTCGCCGGGCGGCAACCGCAGCTTGTATCCAGCGAGGCGGAGCCGCCCAACCTGATGGCCGGCAGTCCGGT ACACCAGCGCCTTCAGGCCCTGAGCCAGCTTATGGTTCCCCTCAATCTGCTGCACCCGGATGCGCCGGAATTTGCCCCGG CATACTGCCGCACCCTGCACGACATTACCCGGTTCTGCCATGAAAAATCCGTCCGCCTCATGTTTGAAGAGGAAGAGGCG GGAGTCAGCAGGCGAATGGGCAAGCAACTGCGCGCCGGGGCCAAACTGCAGTACTGGATTGTGGATATGGGCGGCGGTTT CAAACGTCGTGTGCCCGGGCCGGTGGTGGATCTGGATATTATTGCCAGCGCGCCCATGCTTGCCCTCTGGGACGGTATGG TGGCAGTGCCGTGGGCAGGGCCTCCAGCGGCCAGCGCTTCGGGCTTCATGACGGTAATGCTTGAAAGCGCTATGAATCCG GAGCTTGAAAGCACTGCGCCCAATACTATGGCAAACAAGAATTTTTTTATCATTTCAGATAACTATATGATATTACAGGC TCGCTACGGGTACCACTTCTGTACTGTGGAATCTCTGGCAGGCGAAGAAAGCCACGAAAATTTCGTGAGTTTCCAGTTCA AGGGGGGGGCTGCTGACCGCAAGCGGCGGCAGTTGCGCGCCCGCATGGTGGCGGATCTTCTGGAACATCATGGCTTCAGG GCGGACGTGAAGGACGACTCTGTTTTTGCCGTGGCCGAAGGATACGACGCTACAGAAACCCTGATGCGCACCCGCCTGCT TGGCTATCTGCTCATTCATACCCGCCAGGTAGATATGATCATGCTGGATACGGAACGGGCCAAGGCTCTCAAAGACAAGA TGGCCGCCGATATGGAGGGCATGAAAGGCAGACCGCTCAAAGGTTGCTCCTGTTAG
Upstream 100 bases:
>100_bases GAGGGGCTTGACCTTGGCGCGTATGACTACATGCTCAAGCCCGTAGCCATCAGCGAGCTTATCATCAAGATGGAGGAAGC GGTTCGCTCCGCTGTGTAAG
Downstream 100 bases:
>100_bases TTGCGCCCGGCAAAAAACATCTGCTGCCGTGGCGGCGGGATTTCATGTAACAGGCTGATTCTGTGTTACGGTTGCCTGAA GATTGCGTACGCCAGACAAG
Product: Pyruvate, water dikinase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 871; Mature: 870
Protein sequence:
>871_residues MALLKYLRHWIGRDQPGEPDPEELAREEELKMRLRERCARFRRLLSANKRALEAMSEVEDRLNGAKPFGMDYVHAVSTRA VTAVFQMVRELNALSGNAYAGLLEPFGRIRGQMEALLEEPPHQDGPLILHLDQISLSDLTLVGGKMANLGEVAANAGLSV PDGFAVTVSAYYRFMEYNGLQSELNRLIQATDMQSLDQVFSLAAALQKAVLTAPLPPELENAITEAVAIMRAKAGPGLKL ALRSSAVGEDSLGVTFAGQYRSELNVPPEEACEVWKEIIASKYAVTAMSYRYHHGIPDDAAPMCVGVLAMVPAAAGGVAY SRDPVAASRGREQILLNAVAGLPQAVVDGAVTPDVYVFSREIPPKFIRKRLAGPEGTPPSLTDSQAAELAKVALALESYY TEPQDVEWALDAEDGRIVVLQSRPLHEADSATEQSHAEPQRTGEQGGEAFALDDLPSGLQVLAAGGVAVSPGVGIGPAFV ARKEADMLSFPKGGILVVERALPRWAPLLSRASGLVSEAGGMAGHLASVAREYRLPALFSLPDARLLLDNTGEVTLDAAR CAVFAGRQPQLVSSEAEPPNLMAGSPVHQRLQALSQLMVPLNLLHPDAPEFAPAYCRTLHDITRFCHEKSVRLMFEEEEA GVSRRMGKQLRAGAKLQYWIVDMGGGFKRRVPGPVVDLDIIASAPMLALWDGMVAVPWAGPPAASASGFMTVMLESAMNP ELESTAPNTMANKNFFIISDNYMILQARYGYHFCTVESLAGEESHENFVSFQFKGGAADRKRRQLRARMVADLLEHHGFR ADVKDDSVFAVAEGYDATETLMRTRLLGYLLIHTRQVDMIMLDTERAKALKDKMAADMEGMKGRPLKGCSC
Sequences:
>Translated_871_residues MALLKYLRHWIGRDQPGEPDPEELAREEELKMRLRERCARFRRLLSANKRALEAMSEVEDRLNGAKPFGMDYVHAVSTRA VTAVFQMVRELNALSGNAYAGLLEPFGRIRGQMEALLEEPPHQDGPLILHLDQISLSDLTLVGGKMANLGEVAANAGLSV PDGFAVTVSAYYRFMEYNGLQSELNRLIQATDMQSLDQVFSLAAALQKAVLTAPLPPELENAITEAVAIMRAKAGPGLKL ALRSSAVGEDSLGVTFAGQYRSELNVPPEEACEVWKEIIASKYAVTAMSYRYHHGIPDDAAPMCVGVLAMVPAAAGGVAY SRDPVAASRGREQILLNAVAGLPQAVVDGAVTPDVYVFSREIPPKFIRKRLAGPEGTPPSLTDSQAAELAKVALALESYY TEPQDVEWALDAEDGRIVVLQSRPLHEADSATEQSHAEPQRTGEQGGEAFALDDLPSGLQVLAAGGVAVSPGVGIGPAFV ARKEADMLSFPKGGILVVERALPRWAPLLSRASGLVSEAGGMAGHLASVAREYRLPALFSLPDARLLLDNTGEVTLDAAR CAVFAGRQPQLVSSEAEPPNLMAGSPVHQRLQALSQLMVPLNLLHPDAPEFAPAYCRTLHDITRFCHEKSVRLMFEEEEA GVSRRMGKQLRAGAKLQYWIVDMGGGFKRRVPGPVVDLDIIASAPMLALWDGMVAVPWAGPPAASASGFMTVMLESAMNP ELESTAPNTMANKNFFIISDNYMILQARYGYHFCTVESLAGEESHENFVSFQFKGGAADRKRRQLRARMVADLLEHHGFR ADVKDDSVFAVAEGYDATETLMRTRLLGYLLIHTRQVDMIMLDTERAKALKDKMAADMEGMKGRPLKGCSC >Mature_870_residues ALLKYLRHWIGRDQPGEPDPEELAREEELKMRLRERCARFRRLLSANKRALEAMSEVEDRLNGAKPFGMDYVHAVSTRAV TAVFQMVRELNALSGNAYAGLLEPFGRIRGQMEALLEEPPHQDGPLILHLDQISLSDLTLVGGKMANLGEVAANAGLSVP DGFAVTVSAYYRFMEYNGLQSELNRLIQATDMQSLDQVFSLAAALQKAVLTAPLPPELENAITEAVAIMRAKAGPGLKLA LRSSAVGEDSLGVTFAGQYRSELNVPPEEACEVWKEIIASKYAVTAMSYRYHHGIPDDAAPMCVGVLAMVPAAAGGVAYS RDPVAASRGREQILLNAVAGLPQAVVDGAVTPDVYVFSREIPPKFIRKRLAGPEGTPPSLTDSQAAELAKVALALESYYT EPQDVEWALDAEDGRIVVLQSRPLHEADSATEQSHAEPQRTGEQGGEAFALDDLPSGLQVLAAGGVAVSPGVGIGPAFVA RKEADMLSFPKGGILVVERALPRWAPLLSRASGLVSEAGGMAGHLASVAREYRLPALFSLPDARLLLDNTGEVTLDAARC AVFAGRQPQLVSSEAEPPNLMAGSPVHQRLQALSQLMVPLNLLHPDAPEFAPAYCRTLHDITRFCHEKSVRLMFEEEEAG VSRRMGKQLRAGAKLQYWIVDMGGGFKRRVPGPVVDLDIIASAPMLALWDGMVAVPWAGPPAASASGFMTVMLESAMNPE LESTAPNTMANKNFFIISDNYMILQARYGYHFCTVESLAGEESHENFVSFQFKGGAADRKRRQLRARMVADLLEHHGFRA DVKDDSVFAVAEGYDATETLMRTRLLGYLLIHTRQVDMIMLDTERAKALKDKMAADMEGMKGRPLKGCSC
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=469, Percent_Identity=31.3432835820896, Blast_Score=207, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17564524, Length=307, Percent_Identity=27.0358306188925, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 94537; Mature: 94405
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLKYLRHWIGRDQPGEPDPEELAREEELKMRLRERCARFRRLLSANKRALEAMSEVED CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNGAKPFGMDYVHAVSTRAVTAVFQMVRELNALSGNAYAGLLEPFGRIRGQMEALLEEP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PHQDGPLILHLDQISLSDLTLVGGKMANLGEVAANAGLSVPDGFAVTVSAYYRFMEYNGL CCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCH QSELNRLIQATDMQSLDQVFSLAAALQKAVLTAPLPPELENAITEAVAIMRAKAGPGLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEE ALRSSAVGEDSLGVTFAGQYRSELNVPPEEACEVWKEIIASKYAVTAMSYRYHHGIPDDA EEECCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH APMCVGVLAMVPAAAGGVAYSRDPVAASRGREQILLNAVAGLPQAVVDGAVTPDVYVFSR HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEC EIPPKFIRKRLAGPEGTPPSLTDSQAAELAKVALALESYYTEPQDVEWALDAEDGRIVVL CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEE QSRPLHEADSATEQSHAEPQRTGEQGGEAFALDDLPSGLQVLAAGGVAVSPGVGIGPAFV CCCCCCCCCCHHHHHCCCHHHHHHCCCCEEEECCCCCCHHHHCCCCEEECCCCCCCHHHH ARKEADMLSFPKGGILVVERALPRWAPLLSRASGLVSEAGGMAGHLASVAREYRLPALFS HHHHHHHHCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEC LPDARLLLDNTGEVTLDAARCAVFAGRQPQLVSSEAEPPNLMAGSPVHQRLQALSQLMVP CCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LNLLHPDAPEFAPAYCRTLHDITRFCHEKSVRLMFEEEEAGVSRRMGKQLRAGAKLQYWI HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEE VDMGGGFKRRVPGPVVDLDIIASAPMLALWDGMVAVPWAGPPAASASGFMTVMLESAMNP EECCCCCCCCCCCCEEEHHHHHCCCHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCCC ELESTAPNTMANKNFFIISDNYMILQARYGYHFCTVESLAGEESHENFVSFQFKGGAADR CCCCCCCCCCCCCEEEEEECCEEEEEEECCEEEEEHHHHCCCCCCCCEEEEEECCCCCHH KRRQLRARMVADLLEHHGFRADVKDDSVFAVAEGYDATETLMRTRLLGYLLIHTRQVDMI HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEE MLDTERAKALKDKMAADMEGMKGRPLKGCSC EEECHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ALLKYLRHWIGRDQPGEPDPEELAREEELKMRLRERCARFRRLLSANKRALEAMSEVED HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNGAKPFGMDYVHAVSTRAVTAVFQMVRELNALSGNAYAGLLEPFGRIRGQMEALLEEP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PHQDGPLILHLDQISLSDLTLVGGKMANLGEVAANAGLSVPDGFAVTVSAYYRFMEYNGL CCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCH QSELNRLIQATDMQSLDQVFSLAAALQKAVLTAPLPPELENAITEAVAIMRAKAGPGLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEE ALRSSAVGEDSLGVTFAGQYRSELNVPPEEACEVWKEIIASKYAVTAMSYRYHHGIPDDA EEECCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH APMCVGVLAMVPAAAGGVAYSRDPVAASRGREQILLNAVAGLPQAVVDGAVTPDVYVFSR HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEC EIPPKFIRKRLAGPEGTPPSLTDSQAAELAKVALALESYYTEPQDVEWALDAEDGRIVVL CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEE QSRPLHEADSATEQSHAEPQRTGEQGGEAFALDDLPSGLQVLAAGGVAVSPGVGIGPAFV CCCCCCCCCCHHHHHCCCHHHHHHCCCCEEEECCCCCCHHHHCCCCEEECCCCCCCHHHH ARKEADMLSFPKGGILVVERALPRWAPLLSRASGLVSEAGGMAGHLASVAREYRLPALFS HHHHHHHHCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEC LPDARLLLDNTGEVTLDAARCAVFAGRQPQLVSSEAEPPNLMAGSPVHQRLQALSQLMVP CCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LNLLHPDAPEFAPAYCRTLHDITRFCHEKSVRLMFEEEEAGVSRRMGKQLRAGAKLQYWI HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEE VDMGGGFKRRVPGPVVDLDIIASAPMLALWDGMVAVPWAGPPAASASGFMTVMLESAMNP EECCCCCCCCCCCCEEEHHHHHCCCHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCCC ELESTAPNTMANKNFFIISDNYMILQARYGYHFCTVESLAGEESHENFVSFQFKGGAADR CCCCCCCCCCCCCEEEEEECCEEEEEEECCEEEEEHHHHCCCCCCCCEEEEEECCCCCHH KRRQLRARMVADLLEHHGFRADVKDDSVFAVAEGYDATETLMRTRLLGYLLIHTRQVDMI HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEE MLDTERAKALKDKMAADMEGMKGRPLKGCSC EEECHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]