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The map label for this gene is fecD [C]

Identifier: 220904782

GI number: 220904782

Start: 1806963

End: 1807970

Strand: Reverse

Name: fecD [C]

Synonym: Ddes_1514

Alternate gene names: 220904782

Gene position: 1807970-1806963 (Counterclockwise)

Preceding gene: 220904783

Following gene: 220904781

Centisome position: 62.92

GC content: 58.43

Gene sequence:

>1008_bases
ATGGCACATTCTAGAAAAACCCTGCTCGTGCTTGCCCTGCTTTTGCTGGCGGCAATTGTGTTTGCCCTGCCCATGGGCCG
CTATCCGCTGCCCCTGGGTGATCTTTGCCGCAGTCTGCTGGATGCCTGGGCGGGGCGGCCTCTGGATGACGAGCAGCGCA
GGCACCTTTTTCTGTTTTTTGACCTGCGTCTGCCGCGTATCGGTTCAGCCCTGCTGGTGGGGGCCTGCCTGTCCGCTTCG
GGTACGGTATACCAGAACATGTTTCAGAATCCTCTTGTGTCGCCGGGCATACTGGGTGTGCAGCACGGAGCTGCATTTGG
CGCGGCCATAGGTATTGTGTTTTTTTCTTCCTGGCCGCTGACACAGGCTTTTTCCTTCGCGGGCGGCACGCTGGGCGTGG
GGCTGTCTCTCTTTTTTGCATGGCTCTACCCCAGGGCGCGTTTTTTGGCGCTTGTGGTGGGCGGCCTTGTAAGCAGTTCA
TTTTTTGTGGCTCTGACTTCTCTTGTGCAGTATGTGGCCGACCCCAACCGCCAGCTGCCGGAGCTTGTGTACTGGCTTAT
GGGGACGCTGTCCCGCACGGAGCCGCATCAACTGGCCTGGAGCGCACCTCTCATGCTGGCCGGCCTGGTCTATATCTGCC
TCAACGGCAAAGCGGTAAACGCTCTTGCTATGGGGGACGATGAGGCCCGTACACTGGGAGTACAGAGCACGGGCATGAAA
TTGCGCCTTATCGGGGCCGCAACACTTGTCTGCTCGCTTACGGTGGTGCTTGCAGGGGTCATCAACTGGGTCGGGCTGGT
CATTCCGCATGTCATGCGTTTCATAGTCGGGCCGGACAACAGGGTGGGGCTTACAGCATCAGCCATGGGCGGCGCGCTTT
TTGTGCTGCTTACAGACACGCTCATACGTTCTGTCTGGACAGTGGAACTTCCATTGGGCATTGCCACATCACTCATCAGC
ATGCCGCTTTTTGCCTTCAGCCTGTGGTACGACTGGAAACGGCGATGA

Upstream 100 bases:

>100_bases
CGTTATCCGGTGGACATCAAGGCAGAGAGCAGGCACTTTATGAAACTTTTTTTCAACCTGGACCTTGATAACGCCCAGGT
GAACGATCTTTTTGAGCCGT

Downstream 100 bases:

>100_bases
TAGAAGTACGCAATCTTACCGTCAGTTATCACCGTGCCCCGCCGGTGCTGAAAAATATTTCCTTGCGTGTAGGCAGAGGG
GAGGTGGTCAATGTGCTTGG

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MAHSRKTLLVLALLLLAAIVFALPMGRYPLPLGDLCRSLLDAWAGRPLDDEQRRHLFLFFDLRLPRIGSALLVGACLSAS
GTVYQNMFQNPLVSPGILGVQHGAAFGAAIGIVFFSSWPLTQAFSFAGGTLGVGLSLFFAWLYPRARFLALVVGGLVSSS
FFVALTSLVQYVADPNRQLPELVYWLMGTLSRTEPHQLAWSAPLMLAGLVYICLNGKAVNALAMGDDEARTLGVQSTGMK
LRLIGAATLVCSLTVVLAGVINWVGLVIPHVMRFIVGPDNRVGLTASAMGGALFVLLTDTLIRSVWTVELPLGIATSLIS
MPLFAFSLWYDWKRR

Sequences:

>Translated_335_residues
MAHSRKTLLVLALLLLAAIVFALPMGRYPLPLGDLCRSLLDAWAGRPLDDEQRRHLFLFFDLRLPRIGSALLVGACLSAS
GTVYQNMFQNPLVSPGILGVQHGAAFGAAIGIVFFSSWPLTQAFSFAGGTLGVGLSLFFAWLYPRARFLALVVGGLVSSS
FFVALTSLVQYVADPNRQLPELVYWLMGTLSRTEPHQLAWSAPLMLAGLVYICLNGKAVNALAMGDDEARTLGVQSTGMK
LRLIGAATLVCSLTVVLAGVINWVGLVIPHVMRFIVGPDNRVGLTASAMGGALFVLLTDTLIRSVWTVELPLGIATSLIS
MPLFAFSLWYDWKRR
>Mature_334_residues
AHSRKTLLVLALLLLAAIVFALPMGRYPLPLGDLCRSLLDAWAGRPLDDEQRRHLFLFFDLRLPRIGSALLVGACLSASG
TVYQNMFQNPLVSPGILGVQHGAAFGAAIGIVFFSSWPLTQAFSFAGGTLGVGLSLFFAWLYPRARFLALVVGGLVSSSF
FVALTSLVQYVADPNRQLPELVYWLMGTLSRTEPHQLAWSAPLMLAGLVYICLNGKAVNALAMGDDEARTLGVQSTGMKL
RLIGAATLVCSLTVVLAGVINWVGLVIPHVMRFIVGPDNRVGLTASAMGGALFVLLTDTLIRSVWTVELPLGIATSLISM
PLFAFSLWYDWKRR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=314, Percent_Identity=31.5286624203822, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788004, Length=289, Percent_Identity=33.2179930795848, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790741, Length=273, Percent_Identity=30.4029304029304, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786805, Length=297, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786804, Length=286, Percent_Identity=30.4195804195804, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1786347, Length=342, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36220; Mature: 36089

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSRKTLLVLALLLLAAIVFALPMGRYPLPLGDLCRSLLDAWAGRPLDDEQRRHLFLFF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCEEEEEE
DLRLPRIGSALLVGACLSASGTVYQNMFQNPLVSPGILGVQHGAAFGAAIGIVFFSSWPL
EECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCH
TQAFSFAGGTLGVGLSLFFAWLYPRARFLALVVGGLVSSSFFVALTSLVQYVADPNRQLP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ELVYWLMGTLSRTEPHQLAWSAPLMLAGLVYICLNGKAVNALAMGDDEARTLGVQSTGMK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHEECEECCCCE
LRLIGAATLVCSLTVVLAGVINWVGLVIPHVMRFIVGPDNRVGLTASAMGGALFVLLTDT
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHH
LIRSVWTVELPLGIATSLISMPLFAFSLWYDWKRR
HHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHSRKTLLVLALLLLAAIVFALPMGRYPLPLGDLCRSLLDAWAGRPLDDEQRRHLFLFF
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCEEEEEE
DLRLPRIGSALLVGACLSASGTVYQNMFQNPLVSPGILGVQHGAAFGAAIGIVFFSSWPL
EECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCH
TQAFSFAGGTLGVGLSLFFAWLYPRARFLALVVGGLVSSSFFVALTSLVQYVADPNRQLP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ELVYWLMGTLSRTEPHQLAWSAPLMLAGLVYICLNGKAVNALAMGDDEARTLGVQSTGMK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHEECEECCCCE
LRLIGAATLVCSLTVVLAGVINWVGLVIPHVMRFIVGPDNRVGLTASAMGGALFVLLTDT
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHH
LIRSVWTVELPLGIATSLISMPLFAFSLWYDWKRR
HHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]