| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904712
Identifier: 220904712
GI number: 220904712
Start: 1731092
End: 1732837
Strand: Direct
Name: 220904712
Synonym: Ddes_1444
Alternate gene names: NA
Gene position: 1731092-1732837 (Clockwise)
Preceding gene: 220904711
Following gene: 220904713
Centisome position: 60.24
GC content: 58.59
Gene sequence:
>1746_bases ATGAAACGAAAAAATATCGCGCTGCTCTGCGCCCTGATCATGGCCGCCGCCACATCCTTCTCCCTTCTTGGCTGCGGCGG CTGTGCCGGAACCAAAGCCCCGGCCGACCAAAGCCAGGCCGAAGAAAGCTCTGCGGTGCTGCGCGATGTTGAAATCCGGC AGTCCGAAGAGCAGCTTTCGCCCGAGGCCCAGAGTACCTACGCCTTTCTTCTGTGCGCCCAGGCCCTGAATACAGAAGAC GAGGCAGCCCTGCTGCGGGCCGCGCCCCTCATGACTGCAGCCGGGCTGCCGGCCAGTATCTGGCTGGAGGGCGGCGTCTG GCTTGTAAGCCGCAAATCTGCCGCGGCCGTACCCTATCTTGAGCAGGGGCTTTCAGTGGCGCCCGACGACATGTCGCTCA ACCTGCTCTATGCCGAAGCGCTTATGGAACAGGGGACTCCCGAGCGCGGCGTGGAGCTTATGCGCACCTATCTGGCAAAG CACCCGGACTCGCTGGACGCCCGCCTGGAGCTGGCCCTTCTGCTGGTCAAAAGCAAGGAATACACTGAGGCTGAAAGCCT GCTCAACAGCGTAACCGCCAAGGAACGCACCCCGCTGGTGGACTACTATCATGCCCGTGCGCTCATCGGCATGGACAAAC AGGCCGAGGCCATCCCCTACCTGCAGAAAGCCATCAAGGAAATGCCCGACTTTGTGGAGGCCATGGCTGAACTGGCGTTC ATTCACGAGCAGCGCGCTGAGCTTAAATCTGCGCGCAACCTATACGAAAAGCTGCTTAAATTCAATTTTTCTCCTCAGGA TGTGCTGCTGCGGCTCATCAACCTTTCCCTGCGCATGAATCAACCTGAAAAGGCACTGAAATACATGCGCCAGGGACCGG ACACCATCCCCTTCAAGCTCACGGTAGCGGGGCTTTTCATCGATTCGCGCCACTACCTGCAAGCTGAAAGTCTGCTCAAG CAGATCGCCGCCAAAGACGATGCCCCAGTGGATGTCTACCTGCTGCTGGCCGACCTTACCTACGAACAGCGCCACGACCT GCCTTTGGCACTTTCGTGGCTGGACAGGATCCCGCCGCAAAGCAAGGCTGCGCCCAGGGGAGCCCTGCTGCGCGTACAGT TGCTCGGCGAATCCGGAAAAGAGCAGGAAGCTCTGGCCGCCACACGGCAGGCCCAGAAACAGTTCAGCGACATCCCCCAG TTCTGGGACCTGGAAATCCGCCTGCTGGCCCGTCAGAAAGAAATGCCGCAGGCCCTTGAGGCCGCGCGCAAGGCTGCAAA AAAATGGCCCGATAATGCGGATATGGCTTTTCTGCTCGGTTCTCTGCTGGACGAATCGGGTGACAAAAAAGAAGCTTTCA AGGTAATGGAGCATATCCTTACCCTGCATCCGGACAACCATCAGGCCCTCAACTACGTAGGCTACACCCTGGCGGATGAA AACCGTGAACTGGAGCGGGCTCTGGCCCTGCTTGTCAAAGCCGACGAACTGTCGCCCGACCAGTCCTATATCGTAGACTC ACTGGCCTGGGCCTTATACCGGCTTGATAAAAATGAAGAAGCCCTGATCCAGATACGCCGGGCCGTCAAGCTTGACGAAA ATGCCGATGCCTCCATCTGGGAACACTACGGCGACATTGCCTCGAAGGCCGGACTCAAGGACGAGGCCCGTAATGCCTAC CAGAAAGCGCTGGACCTCAAACCCGACAATGCGGACGCATTGCGGCAGAGACTTTCAAAACAATGA
Upstream 100 bases:
>100_bases CTTCAAATCCTTGCCGCCAAATGATTGCAGGACGACTTTGCCGGCCGGTAAGCACTCATTTGAGGCGATAACTGCTTTAA GCGCACGGATACAGTCCGCA
Downstream 100 bases:
>100_bases AAAAAATCTTCGTCCTTTGCTGCATCTGCAGTCTTGCCCTGCTGGCCGCCTGCGCCCGCCAGCCTTCTCTGGACATGACT CCCGAAAATCAGGCCAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MKRKNIALLCALIMAAATSFSLLGCGGCAGTKAPADQSQAEESSAVLRDVEIRQSEEQLSPEAQSTYAFLLCAQALNTED EAALLRAAPLMTAAGLPASIWLEGGVWLVSRKSAAAVPYLEQGLSVAPDDMSLNLLYAEALMEQGTPERGVELMRTYLAK HPDSLDARLELALLLVKSKEYTEAESLLNSVTAKERTPLVDYYHARALIGMDKQAEAIPYLQKAIKEMPDFVEAMAELAF IHEQRAELKSARNLYEKLLKFNFSPQDVLLRLINLSLRMNQPEKALKYMRQGPDTIPFKLTVAGLFIDSRHYLQAESLLK QIAAKDDAPVDVYLLLADLTYEQRHDLPLALSWLDRIPPQSKAAPRGALLRVQLLGESGKEQEALAATRQAQKQFSDIPQ FWDLEIRLLARQKEMPQALEAARKAAKKWPDNADMAFLLGSLLDESGDKKEAFKVMEHILTLHPDNHQALNYVGYTLADE NRELERALALLVKADELSPDQSYIVDSLAWALYRLDKNEEALIQIRRAVKLDENADASIWEHYGDIASKAGLKDEARNAY QKALDLKPDNADALRQRLSKQ
Sequences:
>Translated_581_residues MKRKNIALLCALIMAAATSFSLLGCGGCAGTKAPADQSQAEESSAVLRDVEIRQSEEQLSPEAQSTYAFLLCAQALNTED EAALLRAAPLMTAAGLPASIWLEGGVWLVSRKSAAAVPYLEQGLSVAPDDMSLNLLYAEALMEQGTPERGVELMRTYLAK HPDSLDARLELALLLVKSKEYTEAESLLNSVTAKERTPLVDYYHARALIGMDKQAEAIPYLQKAIKEMPDFVEAMAELAF IHEQRAELKSARNLYEKLLKFNFSPQDVLLRLINLSLRMNQPEKALKYMRQGPDTIPFKLTVAGLFIDSRHYLQAESLLK QIAAKDDAPVDVYLLLADLTYEQRHDLPLALSWLDRIPPQSKAAPRGALLRVQLLGESGKEQEALAATRQAQKQFSDIPQ FWDLEIRLLARQKEMPQALEAARKAAKKWPDNADMAFLLGSLLDESGDKKEAFKVMEHILTLHPDNHQALNYVGYTLADE NRELERALALLVKADELSPDQSYIVDSLAWALYRLDKNEEALIQIRRAVKLDENADASIWEHYGDIASKAGLKDEARNAY QKALDLKPDNADALRQRLSKQ >Mature_581_residues MKRKNIALLCALIMAAATSFSLLGCGGCAGTKAPADQSQAEESSAVLRDVEIRQSEEQLSPEAQSTYAFLLCAQALNTED EAALLRAAPLMTAAGLPASIWLEGGVWLVSRKSAAAVPYLEQGLSVAPDDMSLNLLYAEALMEQGTPERGVELMRTYLAK HPDSLDARLELALLLVKSKEYTEAESLLNSVTAKERTPLVDYYHARALIGMDKQAEAIPYLQKAIKEMPDFVEAMAELAF IHEQRAELKSARNLYEKLLKFNFSPQDVLLRLINLSLRMNQPEKALKYMRQGPDTIPFKLTVAGLFIDSRHYLQAESLLK QIAAKDDAPVDVYLLLADLTYEQRHDLPLALSWLDRIPPQSKAAPRGALLRVQLLGESGKEQEALAATRQAQKQFSDIPQ FWDLEIRLLARQKEMPQALEAARKAAKKWPDNADMAFLLGSLLDESGDKKEAFKVMEHILTLHPDNHQALNYVGYTLADE NRELERALALLVKADELSPDQSYIVDSLAWALYRLDKNEEALIQIRRAVKLDENADASIWEHYGDIASKAGLKDEARNAY QKALDLKPDNADALRQRLSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 64808; Mature: 64808
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKNIALLCALIMAAATSFSLLGCGGCAGTKAPADQSQAEESSAVLRDVEIRQSEEQLS CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PEAQSTYAFLLCAQALNTEDEAALLRAAPLMTAAGLPASIWLEGGVWLVSRKSAAAVPYL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCHH EQGLSVAPDDMSLNLLYAEALMEQGTPERGVELMRTYLAKHPDSLDARLELALLLVKSKE HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC YTEAESLLNSVTAKERTPLVDYYHARALIGMDKQAEAIPYLQKAIKEMPDFVEAMAELAF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IHEQRAELKSARNLYEKLLKFNFSPQDVLLRLINLSLRMNQPEKALKYMRQGPDTIPFKL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEE TVAGLFIDSRHYLQAESLLKQIAAKDDAPVDVYLLLADLTYEQRHDLPLALSWLDRIPPQ EEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHCCCCHHHHHHHCCCCC SKAAPRGALLRVQLLGESGKEQEALAATRQAQKQFSDIPQFWDLEIRLLARQKEMPQALE CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH AARKAAKKWPDNADMAFLLGSLLDESGDKKEAFKVMEHILTLHPDNHQALNYVGYTLADE HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCEEECCC NRELERALALLVKADELSPDQSYIVDSLAWALYRLDKNEEALIQIRRAVKLDENADASIW CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH EHYGDIASKAGLKDEARNAYQKALDLKPDNADALRQRLSKQ HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKRKNIALLCALIMAAATSFSLLGCGGCAGTKAPADQSQAEESSAVLRDVEIRQSEEQLS CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PEAQSTYAFLLCAQALNTEDEAALLRAAPLMTAAGLPASIWLEGGVWLVSRKSAAAVPYL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCHH EQGLSVAPDDMSLNLLYAEALMEQGTPERGVELMRTYLAKHPDSLDARLELALLLVKSKE HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC YTEAESLLNSVTAKERTPLVDYYHARALIGMDKQAEAIPYLQKAIKEMPDFVEAMAELAF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IHEQRAELKSARNLYEKLLKFNFSPQDVLLRLINLSLRMNQPEKALKYMRQGPDTIPFKL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEE TVAGLFIDSRHYLQAESLLKQIAAKDDAPVDVYLLLADLTYEQRHDLPLALSWLDRIPPQ EEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHCCCCHHHHHHHCCCCC SKAAPRGALLRVQLLGESGKEQEALAATRQAQKQFSDIPQFWDLEIRLLARQKEMPQALE CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH AARKAAKKWPDNADMAFLLGSLLDESGDKKEAFKVMEHILTLHPDNHQALNYVGYTLADE HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCEEECCC NRELERALALLVKADELSPDQSYIVDSLAWALYRLDKNEEALIQIRRAVKLDENADASIW CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH EHYGDIASKAGLKDEARNAYQKALDLKPDNADALRQRLSKQ HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]