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The map label for this gene is clpS [H]

Identifier: 220904698

GI number: 220904698

Start: 1712745

End: 1713065

Strand: Reverse

Name: clpS [H]

Synonym: Ddes_1430

Alternate gene names: 220904698

Gene position: 1713065-1712745 (Counterclockwise)

Preceding gene: 220904699

Following gene: 220904697

Centisome position: 59.62

GC content: 50.78

Gene sequence:

>321_bases
ATGTCCTCTTTTAAACAGGGCCGCAATGACGGCGAAAGCCAGGTTATTGTGGAAAAAAAGCTGAAGGAGCCGGATCGTTA
CCGGGTTCTCCTGCATAATGACGACTATACCAGCATGGACTTCGTGGTGGCTGTTCTATGCAGTATTTTTAACAAAACCA
CGCAGGAAGCAACCGCCATCATGCTGAACGTGCACCAGCAGGGCGTGGGCCAGTGTGGCGTATACACCCATGAAGTGGCT
GAAACCAAGGTGAAAAGAGTGCATCAGGCAGCCAGAGCCGCCGGATTTCCCCTCAAGTGCACCATGGAAAAAATTTACTG
A

Upstream 100 bases:

>100_bases
GCGAAGCGCAAAGAAAAGCCTGGCGGCAGCAACTGGGACTGGGGGAGGAAAACGCTGTTCCCCCGGTATCGCGCTGAAAA
CTGTACTGTGGAGCCATTGA

Downstream 100 bases:

>100_bases
GATTGCCTATGCTGAGCAAGAGTGTTCAAAGCGTCATTCGTGATGCGCTTATGGAAGCGCACCGGCGCCGCCATGATATG
TTGACTGTCGAGCACGTGCT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSSFKQGRNDGESQVIVEKKLKEPDRYRVLLHNDDYTSMDFVVAVLCSIFNKTTQEATAIMLNVHQQGVGQCGVYTHEVA
ETKVKRVHQAARAAGFPLKCTMEKIY

Sequences:

>Translated_106_residues
MSSFKQGRNDGESQVIVEKKLKEPDRYRVLLHNDDYTSMDFVVAVLCSIFNKTTQEATAIMLNVHQQGVGQCGVYTHEVA
ETKVKRVHQAARAAGFPLKCTMEKIY
>Mature_105_residues
SSFKQGRNDGESQVIVEKKLKEPDRYRVLLHNDDYTSMDFVVAVLCSIFNKTTQEATAIMLNVHQQGVGQCGVYTHEVAE
TKVKRVHQAARAAGFPLKCTMEKIY

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=88, Percent_Identity=52.2727272727273, Blast_Score=92, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11979; Mature: 11848

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFKQGRNDGESQVIVEKKLKEPDRYRVLLHNDDYTSMDFVVAVLCSIFNKTTQEATAI
CCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHH
MLNVHQQGVGQCGVYTHEVAETKVKRVHQAARAAGFPLKCTMEKIY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCC
>Mature Secondary Structure 
SSFKQGRNDGESQVIVEKKLKEPDRYRVLLHNDDYTSMDFVVAVLCSIFNKTTQEATAI
CCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHH
MLNVHQQGVGQCGVYTHEVAETKVKRVHQAARAAGFPLKCTMEKIY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA