Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
---|---|
Accession | NC_011883 |
Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904663
Identifier: 220904663
GI number: 220904663
Start: 1670824
End: 1671501
Strand: Reverse
Name: 220904663
Synonym: Ddes_1395
Alternate gene names: NA
Gene position: 1671501-1670824 (Counterclockwise)
Preceding gene: 220904664
Following gene: 220904662
Centisome position: 58.17
GC content: 60.18
Gene sequence:
>678_bases ATGTGGAATAGTGGAAATATATGGTCGCCCTGCGTACCCTTGCCTCAAGCGGGCCTTGTGGGCCGCAGGCGCGCCGTTGC GGCAGGTGACAACACGTCTTCCCTCTGCAATGTTGTGGAGGGTGCACCTGCTGGAACCGGCGCAGCGGTACGGCCTGTGG CGGGCCTGTGGCTTTGTACGCTGCTGGTTTGCACAGTGTTGCTCGGCCCCGGAATCCCGGCAGCGGCTCATGGTCAGGAA GTGCAGCAGCCTGTGGCCGCCGGCGCAGCCCCAGGTGTAGAAGCCAGCCGTAAATCTTCCGTTCAGGAGCCGCCCGAAGC CCTGCCGCCGGAGCTTGCTGAAGGCCCTGTGGAAGTGAGGGAACTGTGGACAGGTTCACTCTATTCATCCACCTATAAGG TGGGCCTGTGCTTTTCCGCCGACGGCAAAGTGCGCGGCGTGGTACATTTGCGTCTGTACAACGGCAAGGTAGACGTGTAC CACATTGTGGGCAGCGTCCAGAATAACGAAATACAGGCGCGCCATTCTTCAGGTCATACTTTTAAAGGGCGGCTGGTTTC GGCCAGCAAGGTGGAAGGCGTCATCAAGCTGAAAAACGGCATGAAAGTACGCCTTGAAGGCACCCGCACCCACGATGTTC CCCTTGCCCCCGAGAACTGCGCGCCTCTGCCGCAATAG
Upstream 100 bases:
>100_bases TGGGCGAGCATCAGAAAAACGACTCGTTGCAAGGAATCCGGGTTCTGCCCGGGAAGCTGGTCGTATTCTCGCGGCAGCAC ACCAATCCAGGAAATTGCCT
Downstream 100 bases:
>100_bases GCATCGGCGCGGCAAGAGCGCACGCGGCCTGTGAGGCTCCGGGCCGCCTGTTTAACGTGAAGGAGAAACTATGTTCTGGC TCTGGTTTGCGCTGGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MWNSGNIWSPCVPLPQAGLVGRRRAVAAGDNTSSLCNVVEGAPAGTGAAVRPVAGLWLCTLLVCTVLLGPGIPAAAHGQE VQQPVAAGAAPGVEASRKSSVQEPPEALPPELAEGPVEVRELWTGSLYSSTYKVGLCFSADGKVRGVVHLRLYNGKVDVY HIVGSVQNNEIQARHSSGHTFKGRLVSASKVEGVIKLKNGMKVRLEGTRTHDVPLAPENCAPLPQ
Sequences:
>Translated_225_residues MWNSGNIWSPCVPLPQAGLVGRRRAVAAGDNTSSLCNVVEGAPAGTGAAVRPVAGLWLCTLLVCTVLLGPGIPAAAHGQE VQQPVAAGAAPGVEASRKSSVQEPPEALPPELAEGPVEVRELWTGSLYSSTYKVGLCFSADGKVRGVVHLRLYNGKVDVY HIVGSVQNNEIQARHSSGHTFKGRLVSASKVEGVIKLKNGMKVRLEGTRTHDVPLAPENCAPLPQ >Mature_225_residues MWNSGNIWSPCVPLPQAGLVGRRRAVAAGDNTSSLCNVVEGAPAGTGAAVRPVAGLWLCTLLVCTVLLGPGIPAAAHGQE VQQPVAAGAAPGVEASRKSSVQEPPEALPPELAEGPVEVRELWTGSLYSSTYKVGLCFSADGKVRGVVHLRLYNGKVDVY HIVGSVQNNEIQARHSSGHTFKGRLVSASKVEGVIKLKNGMKVRLEGTRTHDVPLAPENCAPLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23534; Mature: 23534
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNSGNIWSPCVPLPQAGLVGRRRAVAAGDNTSSLCNVVEGAPAGTGAAVRPVAGLWLCT CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LLVCTVLLGPGIPAAAHGQEVQQPVAAGAAPGVEASRKSSVQEPPEALPPELAEGPVEVR HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHHCCCHHHCCCHHHH ELWTGSLYSSTYKVGLCFSADGKVRGVVHLRLYNGKVDVYHIVGSVQNNEIQARHSSGHT HHHCCCHHCCEEEEEEEECCCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCCE FKGRLVSASKVEGVIKLKNGMKVRLEGTRTHDVPLAPENCAPLPQ EECEEEEHHHHCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWNSGNIWSPCVPLPQAGLVGRRRAVAAGDNTSSLCNVVEGAPAGTGAAVRPVAGLWLCT CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LLVCTVLLGPGIPAAAHGQEVQQPVAAGAAPGVEASRKSSVQEPPEALPPELAEGPVEVR HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHHCCCHHHCCCHHHH ELWTGSLYSSTYKVGLCFSADGKVRGVVHLRLYNGKVDVYHIVGSVQNNEIQARHSSGHT HHHCCCHHCCEEEEEEEECCCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCCE FKGRLVSASKVEGVIKLKNGMKVRLEGTRTHDVPLAPENCAPLPQ EECEEEEHHHHCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA