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The map label for this gene is pduU [H]

Identifier: 220904640

GI number: 220904640

Start: 1645072

End: 1645419

Strand: Direct

Name: pduU [H]

Synonym: Ddes_1372

Alternate gene names: 220904640

Gene position: 1645072-1645419 (Clockwise)

Preceding gene: 220904639

Following gene: 220904641

Centisome position: 57.25

GC content: 56.03

Gene sequence:

>348_bases
ATGGAAGAGACCAAACAGCGCATCATACAGGAGTATGTGCCGGGCAGACAGATTACCCTGGCGCATCTCATTGCCAGCCC
GCAAAAAGGCATCTATCTCAAACTCGGGCTGGATGATGAATGCGCTACAGCCATCGGCATTCTGACCATCACTCCCTGCG
AAGGCGTGATCATCGCCGCGGATATAGCCACCAAGGCCGCCAGTGTTGACATCGGCTTTCTTGACCGCTTCGGTGGCTCC
CTGCTGATCACGGGCGATGTGGCCAGCGTGGAGGCAGCCCTGCGCGAAGTATTACAGTATTTCGGCAGTGTACTGCGTTA
CGACCTTACCGACATGACCAGATCCTGA

Upstream 100 bases:

>100_bases
AGCAAGATTGTCATCCCCTCCCCCAGTGAGGATCTGAAAAAACAGTTGCTGTAGGCCCTACCAGGCCCTGCGGCAACAAG
CACGCGACGATGAGGCAAAG

Downstream 100 bases:

>100_bases
GGCCCCGATGCGGCGAATCATGATTATGGGCGAACGGGGCGCGGGCAGGCGCAGTCTTGCCCGCGCCCTGGGTCAGGCCC
CCGTGTTCATGCCGCAGCCG

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MEETKQRIIQEYVPGRQITLAHLIASPQKGIYLKLGLDDECATAIGILTITPCEGVIIAADIATKAASVDIGFLDRFGGS
LLITGDVASVEAALREVLQYFGSVLRYDLTDMTRS

Sequences:

>Translated_115_residues
MEETKQRIIQEYVPGRQITLAHLIASPQKGIYLKLGLDDECATAIGILTITPCEGVIIAADIATKAASVDIGFLDRFGGS
LLITGDVASVEAALREVLQYFGSVLRYDLTDMTRS
>Mature_115_residues
MEETKQRIIQEYVPGRQITLAHLIASPQKGIYLKLGLDDECATAIGILTITPCEGVIIAADIATKAASVDIGFLDRFGGS
LLITGDVASVEAALREVLQYFGSVLRYDLTDMTRS

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4810

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutS/PduU family [H]

Homologues:

Organism=Escherichia coli, GI87082109, Length=111, Percent_Identity=54.954954954955, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009307
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12417; Mature: 12417

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETKQRIIQEYVPGRQITLAHLIASPQKGIYLKLGLDDECATAIGILTITPCEGVIIAA
CCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCHHHHHEEEEEECCCCCEEEEE
DIATKAASVDIGFLDRFGGSLLITGDVASVEAALREVLQYFGSVLRYDLTDMTRS
CCCCCHHCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEETKQRIIQEYVPGRQITLAHLIASPQKGIYLKLGLDDECATAIGILTITPCEGVIIAA
CCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCHHHHHEEEEEECCCCCEEEEE
DIATKAASVDIGFLDRFGGSLLITGDVASVEAALREVLQYFGSVLRYDLTDMTRS
CCCCCHHCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]