| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is adh1 [H]
Identifier: 220904637
GI number: 220904637
Start: 1641739
End: 1642845
Strand: Direct
Name: adh1 [H]
Synonym: Ddes_1369
Alternate gene names: 220904637
Gene position: 1641739-1642845 (Clockwise)
Preceding gene: 220904636
Following gene: 220904638
Centisome position: 57.14
GC content: 58.36
Gene sequence:
>1107_bases GTGACCCAGTTCTACGGAAAGACGAAAATCTGCTACGGCCCTTACGCGCTGGAAACCCTTGAAAGTTTCCCCGCCAGTCA CGCCTTTGTGGTAACTGACCCCTTTATGGTCAAAAGCGGCTTTGCCGACCAGGCTGTAAGCCACTTGAAACGTAAAGGGA TAGGCTTCAGCATTTTTTCAGGTGTGGAGCCGGACCCCACACTGCAGGCCGTGGTAGAAGCCACGGGACATTTTCTGCGC AGCAAGGCAGACATGATTCTTGCTCTCGGCGGCGGCTCGGCCATTGACATGGCCAAAGCCATCTCCTACTTCGGGCACAA AGCCGCCCGCGACCGCAAGGCCATGCTGGTGGCCATTCCCACTACCAGTGGCACCGGGTCAGAAGTAACCTCCATCGCCG TCATCACCGACAAGGTCAATGCGGTCAAGATTCCTCTTAATGACGAGTTGCTCATTCCGGACGCGGCCATCCTTGACGCC CGCTTCACACGCACCGTACCGCCGCATGTGACCGCCTCCACCGGAATGGACGTGCTTACTCACGCTGTGGAGGCCTACAC CTCGCGCCACAGCAACGTTTTTACGGCCATATATGCCGAACGGGCCATACGCAACGTCTTTACCTACCTGCACCGCGCCT ACGAGCAGGGTGACGACATGGTAGCCAGAGACAACATGCTCATAGGTTCCTGCATGGCCGGTCTGGCCTTCACCAACAGC GGGCTTGGCATTACGCACAGCATGGCCCACAGCCTTGGCGGCCAGTTCCACATTCCTCACGGCCTGGCTAACGCGGTGCT GCTGCCCATTGTCATTGACTTCAACAGCTTTGATGCGGGCGTGAAATATCGCGAAATCGCCGAAATGGCAGGCTTGCCCG CCGCCACCGTGGAAGAAGGAACCCGCAATCTGGTGGCAGCCGTGCGCGACCTCAACGCTTCGCTGGGCATTCCCGCTCGC GTGAGGGAACTCAAGGTTGATGAAGGCGAGTACCGCCGCAATCTTGACGCCATGGCCACCAATGCCCTTGAGGACATCTG CACGCAAAGCAATCCGCGCATGCCCTCGCACGATGATATTGTGAGCCTGTTCGAGCGCGTCTGGTAA
Upstream 100 bases:
>100_bases GCCCAAATGCAAGTAAGGCCGGGCAAGGCTTTACTGACCAGACCACACGACGGTAACGCGGGGGCTTTCTTCCGCCCCCG CGTACGCCTCGGAGGATAAC
Downstream 100 bases:
>100_bases ATACAGGCCGAAAACCCACAGGATAAAAGCCATCGCCTGCGCGCGCCAGACGCATGCGCAGAAACGGCCCGGATTTCAGA CCGGAGAAACCTGTTTCTCC
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: BDH [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTQFYGKTKICYGPYALETLESFPASHAFVVTDPFMVKSGFADQAVSHLKRKGIGFSIFSGVEPDPTLQAVVEATGHFLR SKADMILALGGGSAIDMAKAISYFGHKAARDRKAMLVAIPTTSGTGSEVTSIAVITDKVNAVKIPLNDELLIPDAAILDA RFTRTVPPHVTASTGMDVLTHAVEAYTSRHSNVFTAIYAERAIRNVFTYLHRAYEQGDDMVARDNMLIGSCMAGLAFTNS GLGITHSMAHSLGGQFHIPHGLANAVLLPIVIDFNSFDAGVKYREIAEMAGLPAATVEEGTRNLVAAVRDLNASLGIPAR VRELKVDEGEYRRNLDAMATNALEDICTQSNPRMPSHDDIVSLFERVW
Sequences:
>Translated_368_residues MTQFYGKTKICYGPYALETLESFPASHAFVVTDPFMVKSGFADQAVSHLKRKGIGFSIFSGVEPDPTLQAVVEATGHFLR SKADMILALGGGSAIDMAKAISYFGHKAARDRKAMLVAIPTTSGTGSEVTSIAVITDKVNAVKIPLNDELLIPDAAILDA RFTRTVPPHVTASTGMDVLTHAVEAYTSRHSNVFTAIYAERAIRNVFTYLHRAYEQGDDMVARDNMLIGSCMAGLAFTNS GLGITHSMAHSLGGQFHIPHGLANAVLLPIVIDFNSFDAGVKYREIAEMAGLPAATVEEGTRNLVAAVRDLNASLGIPAR VRELKVDEGEYRRNLDAMATNALEDICTQSNPRMPSHDDIVSLFERVW >Mature_367_residues TQFYGKTKICYGPYALETLESFPASHAFVVTDPFMVKSGFADQAVSHLKRKGIGFSIFSGVEPDPTLQAVVEATGHFLRS KADMILALGGGSAIDMAKAISYFGHKAARDRKAMLVAIPTTSGTGSEVTSIAVITDKVNAVKIPLNDELLIPDAAILDAR FTRTVPPHVTASTGMDVLTHAVEAYTSRHSNVFTAIYAERAIRNVFTYLHRAYEQGDDMVARDNMLIGSCMAGLAFTNSG LGITHSMAHSLGGQFHIPHGLANAVLLPIVIDFNSFDAGVKYREIAEMAGLPAATVEEGTRNLVAAVRDLNASLGIPARV RELKVDEGEYRRNLDAMATNALEDICTQSNPRMPSHDDIVSLFERVW
Specific function: This enzyme has activity using butanol and ethanol as substrates [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=402, Percent_Identity=27.363184079602, Blast_Score=112, Evalue=6e-25, Organism=Escherichia coli, GI87082107, Length=349, Percent_Identity=39.541547277937, Blast_Score=238, Evalue=6e-64, Organism=Escherichia coli, GI1787493, Length=382, Percent_Identity=38.7434554973822, Blast_Score=234, Evalue=5e-63, Organism=Escherichia coli, GI1789163, Length=358, Percent_Identity=36.8715083798883, Blast_Score=217, Evalue=9e-58, Organism=Escherichia coli, GI48994951, Length=362, Percent_Identity=34.2541436464088, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1789386, Length=342, Percent_Identity=25.1461988304094, Blast_Score=88, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17537053, Length=396, Percent_Identity=24.2424242424242, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321181, Length=383, Percent_Identity=31.0704960835509, Blast_Score=187, Evalue=2e-48, Organism=Drosophila melanogaster, GI24657991, Length=400, Percent_Identity=27.5, Blast_Score=112, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: NA
Molecular weight: Translated: 39775; Mature: 39644
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFYGKTKICYGPYALETLESFPASHAFVVTDPFMVKSGFADQAVSHLKRKGIGFSIFS CCCCCCCCEEEECCHHHHHHHHCCCCCEEEEECCHHHHCCCHHHHHHHHHHCCCCEEEEC GVEPDPTLQAVVEATGHFLRSKADMILALGGGSAIDMAKAISYFGHKAARDRKAMLVAIP CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE TTSGTGSEVTSIAVITDKVNAVKIPLNDELLIPDAAILDARFTRTVPPHVTASTGMDVLT CCCCCCCCCEEEEEEEECCCEEEECCCCCEECCCHHHHHHHHHCCCCCCCCCCCCHHHHH HAVEAYTSRHSNVFTAIYAERAIRNVFTYLHRAYEQGDDMVARDNMLIGSCMAGLAFTNS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCC GLGITHSMAHSLGGQFHIPHGLANAVLLPIVIDFNSFDAGVKYREIAEMAGLPAATVEEG CCCHHHHHHHHCCCCEECCHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHH TRNLVAAVRDLNASLGIPARVRELKVDEGEYRRNLDAMATNALEDICTQSNPRMPSHDDI HHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VSLFERVW HHHHHHHC >Mature Secondary Structure TQFYGKTKICYGPYALETLESFPASHAFVVTDPFMVKSGFADQAVSHLKRKGIGFSIFS CCCCCCCEEEECCHHHHHHHHCCCCCEEEEECCHHHHCCCHHHHHHHHHHCCCCEEEEC GVEPDPTLQAVVEATGHFLRSKADMILALGGGSAIDMAKAISYFGHKAARDRKAMLVAIP CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE TTSGTGSEVTSIAVITDKVNAVKIPLNDELLIPDAAILDARFTRTVPPHVTASTGMDVLT CCCCCCCCCEEEEEEEECCCEEEECCCCCEECCCHHHHHHHHHCCCCCCCCCCCCHHHHH HAVEAYTSRHSNVFTAIYAERAIRNVFTYLHRAYEQGDDMVARDNMLIGSCMAGLAFTNS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCC GLGITHSMAHSLGGQFHIPHGLANAVLLPIVIDFNSFDAGVKYREIAEMAGLPAATVEEG CCCHHHHHHHHCCCCEECCHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHH TRNLVAAVRDLNASLGIPARVRELKVDEGEYRRNLDAMATNALEDICTQSNPRMPSHDDI HHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VSLFERVW HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2673928 [H]