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The map label for this gene is pduA [H]

Identifier: 220904636

GI number: 220904636

Start: 1641370

End: 1641654

Strand: Direct

Name: pduA [H]

Synonym: Ddes_1368

Alternate gene names: 220904636

Gene position: 1641370-1641654 (Clockwise)

Preceding gene: 220904635

Following gene: 220904637

Centisome position: 57.12

GC content: 58.95

Gene sequence:

>285_bases
ATGGCGACGATGACTGACGCTTTGGGTATGATTGAAACCCGTGGGCTTGTGGGTGCTGTAGAGGCTGCTGACGCCATGGT
GAAAGCTGCCAACGTAACCCTGATCGGCCGTGAGCAGGTGGGTTCAGGCCTTGTGACTGTGATGGTTCGTGGCGATGTGG
GCGCTGTAAAGGCTGCCACCGATGCCGGTGCCGCCGCCGCTTCGCGCGTGGGCGACCTGGTGAGCGTACACGTGATTCCC
CGTCCCCATGAAGAAGTGGAAATGATTCTGCCCAAATGCAAGTAA

Upstream 100 bases:

>100_bases
GCTGTTGCAGGCTGAATGCCCGCCAGCAGACAATTACGGCGTGACCGCCAACAAACTTTCGGGCCATGCCCGAAGAACAA
CCTGAGGTAAGGAGTAAACA

Downstream 100 bases:

>100_bases
GGCCGGGCAAGGCTTTACTGACCAGACCACACGACGGTAACGCGGGGGCTTTCTTCCGCCCCCGCGTACGCCTCGGAGGA
TAACGTGACCCAGTTCTACG

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MATMTDALGMIETRGLVGAVEAADAMVKAANVTLIGREQVGSGLVTVMVRGDVGAVKAATDAGAAAASRVGDLVSVHVIP
RPHEEVEMILPKCK

Sequences:

>Translated_94_residues
MATMTDALGMIETRGLVGAVEAADAMVKAANVTLIGREQVGSGLVTVMVRGDVGAVKAATDAGAAAASRVGDLVSVHVIP
RPHEEVEMILPKCK
>Mature_93_residues
ATMTDALGMIETRGLVGAVEAADAMVKAANVTLIGREQVGSGLVTVMVRGDVGAVKAATDAGAAAASRVGDLVSVHVIPR
PHEEVEMILPKCK

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=86, Percent_Identity=70.9302325581395, Blast_Score=103, Evalue=1e-24,
Organism=Escherichia coli, GI87082105, Length=86, Percent_Identity=46.5116279069767, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9554; Mature: 9423

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATMTDALGMIETRGLVGAVEAADAMVKAANVTLIGREQVGSGLVTVMVRGDVGAVKAAT
CCCCHHHHHHHHCCCCEEHHHHHHHHHHHCCEEEEEHHHCCCCEEEEEEECCCCCEEECC
DAGAAAASRVGDLVSVHVIPRPHEEVEMILPKCK
CCCHHHHHHCCCEEEEEECCCCCHHHHHCCCCCC
>Mature Secondary Structure 
ATMTDALGMIETRGLVGAVEAADAMVKAANVTLIGREQVGSGLVTVMVRGDVGAVKAAT
CCCHHHHHHHHCCCCEEHHHHHHHHHHHCCEEEEEHHHCCCCEEEEEEECCCCCEEECC
DAGAAAASRVGDLVSVHVIPRPHEEVEMILPKCK
CCCHHHHHHCCCEEEEEECCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]