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The map label for this gene is ccmL [H]

Identifier: 220904633

GI number: 220904633

Start: 1639958

End: 1640245

Strand: Direct

Name: ccmL [H]

Synonym: Ddes_1365

Alternate gene names: 220904633

Gene position: 1639958-1640245 (Clockwise)

Preceding gene: 220904632

Following gene: 220904634

Centisome position: 57.07

GC content: 55.21

Gene sequence:

>288_bases
ATGCTTATAGGCATTGTTGTCGGCAATGTTTGGGCCACCCGCAAAGAAGATTCCCTCAACGGGCTGAAGCTCATGGTGGT
GCAACGGCTTGACCTCGCCCACAACAAGCTGGCTGAAAGCTTTGTGGCCGTGGACTGTGTGGGAGCTGGCATTGGCGAGC
GGGTGCTTATCACCACCGGCAGTTCCGCCCGCAAGGCTCTGTATAATCAGGAAGCGCCCGTTGATGCCGCCATTGTGGGC
ATTCTCGATCAGGAAGAAATGATGGGCAAAAAACCGGAGAGCACATAA

Upstream 100 bases:

>100_bases
CAGACCCTTCGCGTGCCACGCCGGGCTGTGGTGACGCCCCTGGCCCAGGAGGCCGCGGCGAACAACCATATGACCATTTT
GAAAAATCTGTAGGTGTCAC

Downstream 100 bases:

>100_bases
GCCATGGATACTCTGGGCATTGTGGACAGCCGCAGCATAGCGGCCGGTGCTGAAATCACCGATGCCATGCTCAAGGCCGC
GCCTGTTACTCTGGTGCGGG

Product: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MLIGIVVGNVWATRKEDSLNGLKLMVVQRLDLAHNKLAESFVAVDCVGAGIGERVLITTGSSARKALYNQEAPVDAAIVG
ILDQEEMMGKKPEST

Sequences:

>Translated_95_residues
MLIGIVVGNVWATRKEDSLNGLKLMVVQRLDLAHNKLAESFVAVDCVGAGIGERVLITTGSSARKALYNQEAPVDAAIVG
ILDQEEMMGKKPEST
>Mature_95_residues
MLIGIVVGNVWATRKEDSLNGLKLMVVQRLDLAHNKLAESFVAVDCVGAGIGERVLITTGSSARKALYNQEAPVDAAIVG
ILDQEEMMGKKPEST

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=84, Percent_Identity=38.0952380952381, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 10153; Mature: 10153

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGIVVGNVWATRKEDSLNGLKLMVVQRLDLAHNKLAESFVAVDCVGAGIGERVLITTG
CEEEEEECCEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
SSARKALYNQEAPVDAAIVGILDQEEMMGKKPEST
CHHHHHHCCCCCCCCEEEEEEECCHHHCCCCCCCC
>Mature Secondary Structure
MLIGIVVGNVWATRKEDSLNGLKLMVVQRLDLAHNKLAESFVAVDCVGAGIGERVLITTG
CEEEEEECCEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
SSARKALYNQEAPVDAAIVGILDQEEMMGKKPEST
CHHHHHHCCCCCCCCEEEEEEECCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]