| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904597
Identifier: 220904597
GI number: 220904597
Start: 1578864
End: 1579598
Strand: Reverse
Name: 220904597
Synonym: Ddes_1329
Alternate gene names: NA
Gene position: 1579598-1578864 (Counterclockwise)
Preceding gene: 220904598
Following gene: 220904596
Centisome position: 54.97
GC content: 53.74
Gene sequence:
>735_bases ATGAAAATGCCTAGCTGCGGCGACTTCGAATGCGGGCATCATGACTCTATAGCAGTTATGGATGCCACAATGGCAGCCCT TGATCCGGAGCAGGCTCCTGTCGTGGTTATAGCGAACAGAGGCTTGGCGGTCCGGATTGAAGACGGGCACCTCTCCACTG AAGAAAGGGCGCGAGAAGCAAAATTCATCAGGCAGGAGGACCGTCAGAGATTCAGAACAACGCATTTTCTCAAGCGTCGT GTCTGTGCGGCATTTACAGGCATCCAGCCTGAACGGATGAACTTTGGTACGGGTTGGAACAATAAACCCTACCTTAAGGA GTTTACCGGACTTTTTACCTTCAACCTCTCTCACAGTGGCGAGTGGGGCGGCATTGCTGCTGCCAAGGCCAATGCACTGG GGTTCGATGTGCAGGCTGCCATTGAGCTGGCGGATTTTCCAATGAGCGAGATCATGCACCCTCTGGACTGCATCCGGGCG GATAGCCCTGCCTCAGCGGCCCTGGTGTGGGCTGTCAAAGAGGCCGTGACCAAGGCCAACGGCATCGGTCTTGGTTACGC ACTCAAAAAATTGTGCATCAAGCGCACGTCGGATGATGCGGTAAAATCCGTACAACTTTTGGGGCAACAGTGGTTTGTGC GTCACGGCCTTCTTGCGGACGGCAGCGCCATTGCCGTGGCAATGAACACCTGGGTTCAGATGGAAAAAATTCAACTGCTG GAGGTAAAATTTTGA
Upstream 100 bases:
>100_bases GAAATTTTCGTTCTGGACAAAGGAGAAATCAGGGAGCACGGGGCGCACGTTGAGCTTCTTATGGCTGACGGTCTTTATGC AAAATCGTGGAAGGCGCAAA
Downstream 100 bases:
>100_bases TATATATGTCATGGGAAGGCACTGGCTCCGAGCATCGGCTTCAAAAACCCTGTCCCTGGCTAGACGAGGGGGAATACTAA TTTCACTTGAGAGGAGACAG
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKMPSCGDFECGHHDSIAVMDATMAALDPEQAPVVVIANRGLAVRIEDGHLSTEERAREAKFIRQEDRQRFRTTHFLKRR VCAAFTGIQPERMNFGTGWNNKPYLKEFTGLFTFNLSHSGEWGGIAAAKANALGFDVQAAIELADFPMSEIMHPLDCIRA DSPASAALVWAVKEAVTKANGIGLGYALKKLCIKRTSDDAVKSVQLLGQQWFVRHGLLADGSAIAVAMNTWVQMEKIQLL EVKF
Sequences:
>Translated_244_residues MKMPSCGDFECGHHDSIAVMDATMAALDPEQAPVVVIANRGLAVRIEDGHLSTEERAREAKFIRQEDRQRFRTTHFLKRR VCAAFTGIQPERMNFGTGWNNKPYLKEFTGLFTFNLSHSGEWGGIAAAKANALGFDVQAAIELADFPMSEIMHPLDCIRA DSPASAALVWAVKEAVTKANGIGLGYALKKLCIKRTSDDAVKSVQLLGQQWFVRHGLLADGSAIAVAMNTWVQMEKIQLL EVKF >Mature_244_residues MKMPSCGDFECGHHDSIAVMDATMAALDPEQAPVVVIANRGLAVRIEDGHLSTEERAREAKFIRQEDRQRFRTTHFLKRR VCAAFTGIQPERMNFGTGWNNKPYLKEFTGLFTFNLSHSGEWGGIAAAKANALGFDVQAAIELADFPMSEIMHPLDCIRA DSPASAALVWAVKEAVTKANGIGLGYALKKLCIKRTSDDAVKSVQLLGQQWFVRHGLLADGSAIAVAMNTWVQMEKIQLL EVKF
Specific function: Unknown
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26922; Mature: 26922
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMPSCGDFECGHHDSIAVMDATMAALDPEQAPVVVIANRGLAVRIEDGHLSTEERAREA CCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHH KFIRQEDRQRFRTTHFLKRRVCAAFTGIQPERMNFGTGWNNKPYLKEFTGLFTFNLSHSG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCCC EWGGIAAAKANALGFDVQAAIELADFPMSEIMHPLDCIRADSPASAALVWAVKEAVTKAN CCCCEEHHHCCCCCCCHHHHHHHHCCCHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHC GIGLGYALKKLCIKRTSDDAVKSVQLLGQQWFVRHGLLADGSAIAVAMNTWVQMEKIQLL CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHEEEE EVKF EECC >Mature Secondary Structure MKMPSCGDFECGHHDSIAVMDATMAALDPEQAPVVVIANRGLAVRIEDGHLSTEERAREA CCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHH KFIRQEDRQRFRTTHFLKRRVCAAFTGIQPERMNFGTGWNNKPYLKEFTGLFTFNLSHSG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCCC EWGGIAAAKANALGFDVQAAIELADFPMSEIMHPLDCIRADSPASAALVWAVKEAVTKAN CCCCEEHHHCCCCCCCHHHHHHHHCCCHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHC GIGLGYALKKLCIKRTSDDAVKSVQLLGQQWFVRHGLLADGSAIAVAMNTWVQMEKIQLL CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHEEEE EVKF EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA