| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ppnK [H]
Identifier: 220904553
GI number: 220904553
Start: 1514309
End: 1515178
Strand: Reverse
Name: ppnK [H]
Synonym: Ddes_1284
Alternate gene names: 220904553
Gene position: 1515178-1514309 (Counterclockwise)
Preceding gene: 220904562
Following gene: 220904552
Centisome position: 52.73
GC content: 56.9
Gene sequence:
>870_bases ATGCAAAATCAACTCAAGCGCCACATTCTACTGGTCTGCAAGGCCCGCCACGAACGCGCCGCCCAACTGGGTGAAGAAAT TCGCGCGTGGCTTGAAGAGCGTGGTCACAAAGCACATCTTGTAGAGGCCGGGCTGGACTCTTCCCTTTACACGGATGCCC TTGACTTTGTTGTGGTGCTTGGCGGTGACGGCACCATGCTCGGGGTCGCCCGGCGCCTTGTGGGTAGTGATGTGCCGGTG CTGGGTATCAACTTCGGGCGTGTCGGTTTTCTTACAGATGCCCAGCCGGAAAACTGGCGCGAAAAGCTTGCCGAATGTCT GGATGGACACGAGCCGGTTCGCTCCTGTATGGCACTTAGCTGGTCGCTTGTACGCGACGGCGAAGAAATTCAGGGCGGGG CGGCGGTTAATGACGTGGTTGTCAGCCGGGGTTCCCTGTCCAGGCTGGTCTGCCTTGATATATGGGTTGACGGGCAACGC ATGGGGTCGTTGCGCAGCGACGGCATCATATTGTGTACGCCTGTGGGCAGTTCGGGCTACAGCGTATCCGCTGGCGGCCC GCTTCTTTATCCTGCTATGGATGCCATCGGCTTCACGCCTGTGTGCCCTTTTTTGAATACTATTTCCCCCATGGTATTTC CCGGATCGACAGACATAGAGCTTCAGATATTGCGCGGCTCTACGGACTGCTATCTTACGGTGGACGGGCAGGAAGGGCAT AAACTGAAAAAAGACGACCTTGTGCGTATTTCCGGCCTGCCTGCGGCAGTGCGTTTTATGGGAGAAGGCACATGCTTTTT TGAGCGCCTGCGCAGCCGAGGTTTTGTCTTGCAGGGATCTGTGGGGAACTGTACGGGGGAAATGCTGTGA
Upstream 100 bases:
>100_bases TTTGGCTAGGAAGTTTCTGTTCATATGTCAAAGCGCCGGCCCTGACAAGTAAGGCCGGCGGGCTTGCGGTAAGAGCCTTG ATAACGTAAATTGTCACCTT
Downstream 100 bases:
>100_bases ACAAGGCTCTTGCGCCTGCAAAGGTGTGCGATATCCGTCTGGGACAAAATGTTCGTTTTGATGCATGGCTGTACAGCATG CTCATGGATAACAATCTTGC
Product: ATP-NAD/AcoX kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MQNQLKRHILLVCKARHERAAQLGEEIRAWLEERGHKAHLVEAGLDSSLYTDALDFVVVLGGDGTMLGVARRLVGSDVPV LGINFGRVGFLTDAQPENWREKLAECLDGHEPVRSCMALSWSLVRDGEEIQGGAAVNDVVVSRGSLSRLVCLDIWVDGQR MGSLRSDGIILCTPVGSSGYSVSAGGPLLYPAMDAIGFTPVCPFLNTISPMVFPGSTDIELQILRGSTDCYLTVDGQEGH KLKKDDLVRISGLPAAVRFMGEGTCFFERLRSRGFVLQGSVGNCTGEML
Sequences:
>Translated_289_residues MQNQLKRHILLVCKARHERAAQLGEEIRAWLEERGHKAHLVEAGLDSSLYTDALDFVVVLGGDGTMLGVARRLVGSDVPV LGINFGRVGFLTDAQPENWREKLAECLDGHEPVRSCMALSWSLVRDGEEIQGGAAVNDVVVSRGSLSRLVCLDIWVDGQR MGSLRSDGIILCTPVGSSGYSVSAGGPLLYPAMDAIGFTPVCPFLNTISPMVFPGSTDIELQILRGSTDCYLTVDGQEGH KLKKDDLVRISGLPAAVRFMGEGTCFFERLRSRGFVLQGSVGNCTGEML >Mature_289_residues MQNQLKRHILLVCKARHERAAQLGEEIRAWLEERGHKAHLVEAGLDSSLYTDALDFVVVLGGDGTMLGVARRLVGSDVPV LGINFGRVGFLTDAQPENWREKLAECLDGHEPVRSCMALSWSLVRDGEEIQGGAAVNDVVVSRGSLSRLVCLDIWVDGQR MGSLRSDGIILCTPVGSSGYSVSAGGPLLYPAMDAIGFTPVCPFLNTISPMVFPGSTDIELQILRGSTDCYLTVDGQEGH KLKKDDLVRISGLPAAVRFMGEGTCFFERLRSRGFVLQGSVGNCTGEML
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=230, Percent_Identity=26.9565217391304, Blast_Score=97, Evalue=1e-20, Organism=Escherichia coli, GI1788968, Length=249, Percent_Identity=34.136546184739, Blast_Score=145, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6322509, Length=219, Percent_Identity=30.1369863013699, Blast_Score=116, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6320794, Length=236, Percent_Identity=29.2372881355932, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325068, Length=206, Percent_Identity=30.0970873786408, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI161077047, Length=220, Percent_Identity=30.4545454545455, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI28573830, Length=220, Percent_Identity=30.4545454545455, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI28573832, Length=220, Percent_Identity=30.4545454545455, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI28573828, Length=220, Percent_Identity=30.4545454545455, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI28573826, Length=220, Percent_Identity=30.4545454545455, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI281363321, Length=281, Percent_Identity=27.0462633451957, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281363323, Length=281, Percent_Identity=27.0462633451957, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24653422, Length=245, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24653424, Length=281, Percent_Identity=27.0462633451957, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI20129957, Length=281, Percent_Identity=27.0462633451957, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 31250; Mature: 31250
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNQLKRHILLVCKARHERAAQLGEEIRAWLEERGHKAHLVEAGLDSSLYTDALDFVVVL CCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCEEEEEEE GGDGTMLGVARRLVGSDVPVLGINFGRVGFLTDAQPENWREKLAECLDGHEPVRSCMALS CCCCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHH WSLVRDGEEIQGGAAVNDVVVSRGSLSRLVCLDIWVDGQRMGSLRSDGIILCTPVGSSGY HHHHCCCHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCHHHCCCCCCCEEEEEECCCCCC SVSAGGPLLYPAMDAIGFTPVCPFLNTISPMVFPGSTDIELQILRGSTDCYLTVDGQEGH EECCCCCCHHHHHHHCCCCCHHHHHHHCCCEEECCCCCEEEEEEECCCEEEEEEECCCCC KLKKDDLVRISGLPAAVRFMGEGTCFFERLRSRGFVLQGSVGNCTGEML CCCCCCEEEEECCCCEEHEECCCHHHHHHHHHCCEEEECCCCCCCCCCC >Mature Secondary Structure MQNQLKRHILLVCKARHERAAQLGEEIRAWLEERGHKAHLVEAGLDSSLYTDALDFVVVL CCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCEEEEEEE GGDGTMLGVARRLVGSDVPVLGINFGRVGFLTDAQPENWREKLAECLDGHEPVRSCMALS CCCCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHH WSLVRDGEEIQGGAAVNDVVVSRGSLSRLVCLDIWVDGQRMGSLRSDGIILCTPVGSSGY HHHHCCCHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCHHHCCCCCCCEEEEEECCCCCC SVSAGGPLLYPAMDAIGFTPVCPFLNTISPMVFPGSTDIELQILRGSTDCYLTVDGQEGH EECCCCCCHHHHHHHCCCCCHHHHHHHCCCEEECCCCCEEEEEEECCCEEEEEEECCCCC KLKKDDLVRISGLPAAVRFMGEGTCFFERLRSRGFVLQGSVGNCTGEML CCCCCCEEEEECCCCEEHEECCCHHHHHHHHHCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA