| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904505
Identifier: 220904505
GI number: 220904505
Start: 1451176
End: 1451760
Strand: Direct
Name: 220904505
Synonym: Ddes_1236
Alternate gene names: NA
Gene position: 1451176-1451760 (Clockwise)
Preceding gene: 220904503
Following gene: 220904506
Centisome position: 50.5
GC content: 53.85
Gene sequence:
>585_bases ATGAATATACGCAAGATACGTGAAGACCTGGGCCGGGCAAAGGCCAGTTGCATGCGACGCGACCTGTTACGAGCCCTTTA TCTGACCATTGCGGCCTTGAGGGAACTGGGCGGTCAGACCGCCCCCTCTGACCTGCGGGGCGATATCCGTACGACAGTAA ACGCTCTGTCCTCTGACCCCGGCCTTGTGGACCACCTTCCCCCCAACGTGACCTACCAACCCGGCAACGAAAAAGAGCTG CTCCAGATTTTTGCCAGGACGTACAAAAAATTCAAGGCACATGATGAGCAGGAAGATTATGAGACCACCCTCCAACGCAA ACTTAATCTTGACCGCTGGATCAAGGATGGAAAAAAATTCCTTGACGAAGGCCGGCCTTCAGACGCAGATGCCTGTTTTA CCGAAGCCATGAAGTATTACAAGGATGAGCAGGCTGTTTTTGTCATGATGGCCAAAGCCATGATGGATGCCGGAGAATAC GTGCGAGCCATTGGCCATGCGCGCAATGGACTCAAGGAAAATCCTCAGGACGAGACACTGTCACGCCTGATTGACGAATG CACACGCCTGCGGCCGCAAGCCTGA
Upstream 100 bases:
>100_bases CCTCCACAACGGGCGTTTGCTCGTCGCAGCCACCAGAGTATTTTTAAAGTGAAAATACTCTAAAAGATTCGGGCACTACT TTTGACCAAACGAGGCAATC
Downstream 100 bases:
>100_bases CGATGCCCGCAGAAGGCTGCCCTACCCCTTCCTTCTGGTCAGCGCCAGCTTTGCGGCCGCTTTTAGCCTAAAAACACGGC CGCGTCTGACTATCTTCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNIRKIREDLGRAKASCMRRDLLRALYLTIAALRELGGQTAPSDLRGDIRTTVNALSSDPGLVDHLPPNVTYQPGNEKEL LQIFARTYKKFKAHDEQEDYETTLQRKLNLDRWIKDGKKFLDEGRPSDADACFTEAMKYYKDEQAVFVMMAKAMMDAGEY VRAIGHARNGLKENPQDETLSRLIDECTRLRPQA
Sequences:
>Translated_194_residues MNIRKIREDLGRAKASCMRRDLLRALYLTIAALRELGGQTAPSDLRGDIRTTVNALSSDPGLVDHLPPNVTYQPGNEKEL LQIFARTYKKFKAHDEQEDYETTLQRKLNLDRWIKDGKKFLDEGRPSDADACFTEAMKYYKDEQAVFVMMAKAMMDAGEY VRAIGHARNGLKENPQDETLSRLIDECTRLRPQA >Mature_194_residues MNIRKIREDLGRAKASCMRRDLLRALYLTIAALRELGGQTAPSDLRGDIRTTVNALSSDPGLVDHLPPNVTYQPGNEKEL LQIFARTYKKFKAHDEQEDYETTLQRKLNLDRWIKDGKKFLDEGRPSDADACFTEAMKYYKDEQAVFVMMAKAMMDAGEY VRAIGHARNGLKENPQDETLSRLIDECTRLRPQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22182; Mature: 22182
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRKIREDLGRAKASCMRRDLLRALYLTIAALRELGGQTAPSDLRGDIRTTVNALSSDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC GLVDHLPPNVTYQPGNEKELLQIFARTYKKFKAHDEQEDYETTLQRKLNLDRWIKDGKKF CCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDEGRPSDADACFTEAMKYYKDEQAVFVMMAKAMMDAGEYVRAIGHARNGLKENPQDETL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SRLIDECTRLRPQA HHHHHHHHHCCCCC >Mature Secondary Structure MNIRKIREDLGRAKASCMRRDLLRALYLTIAALRELGGQTAPSDLRGDIRTTVNALSSDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC GLVDHLPPNVTYQPGNEKELLQIFARTYKKFKAHDEQEDYETTLQRKLNLDRWIKDGKKF CCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDEGRPSDADACFTEAMKYYKDEQAVFVMMAKAMMDAGEYVRAIGHARNGLKENPQDETL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SRLIDECTRLRPQA HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA