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The map label for this gene is 220904494

Identifier: 220904494

GI number: 220904494

Start: 1438897

End: 1440444

Strand: Reverse

Name: 220904494

Synonym: Ddes_1225

Alternate gene names: NA

Gene position: 1440444-1438897 (Counterclockwise)

Preceding gene: 220904495

Following gene: 220904492

Centisome position: 50.13

GC content: 59.3

Gene sequence:

>1548_bases
ATGTCGGAATCAAAACTACCCCAAAACAGCCGGGCGGGCAATCAGCAAACTGAGGCGGATATGCCCCCGGAAGCGCCTCA
GCCTTTGCCGTGGCCCTCGTCTTTTCGCATCGGCACGGATGGTGTGTACATATGCGAAGATGCCGGCAACGGCACCTACA
GCTATAACTATGTGTTCTCGCCTCTGCACATTCTTGCCCGCACCTGTGACGGGCAAGGCAAGAATTGGGGGCTGCTGGTC
AAGGTGCAGGCTCCCAACGGGCAATGGCATGAGCTGGTGATACCCGTTTCCATGCTGGCCGGGAGTACCACCGTTTTCCG
CGAACTCCTTATGTCGCTGGGCTTGCGCATCGCTTCAGCCAACTACAAATATTTGCTGGCGTATCTGTCCGGAGCCAATC
CGCAACAGATAGTTCGCTCGGTTGACAGGGTGGGTTGGCATGGGGGCTGTTTCCTGCTGCCGGAAAAGTGCTACCCATCT
CAAAGCGAAGCACAGCAAGGCGGTAAATTCGCCCTGCTGTGCAGCGAAGGCGTGAACCCTTTCCAGTGCCGGGGAACGCT
GCACCAATGGCAGGAGCACATAGGCCGATATCTGGCCGGAAATTCCCGCCTGATTCTTGGCGTGTGCGCGGCCTTTGCGG
CTCCGTTGCTGAAACCCTGCGGCGTTGAGGGAGCGGGCATAGGCTTTGAAGGCGATTCCTCTGCGGGCAAGACCACTGCC
CTACAGGTGGCGGGCAGCGTATGCGGCGGGGGCGGGCAGAACGGCTATATCCATCGTTGGCGTCTCACGGACAATGCTCT
GGAAAGCCTTGCGGTGATGCACAATGACAATCTGCTGATATTGGACGAACTCGGCCAGAGTGATGCCAGAACTGCCGCTG
AGAGCGTCTATATGCTTGCCAATGGCCAAGGCAAGGCCCGCGCTCAAAAGGACGGCTCGGCGCGGGTCATAACCGAATGG
CGCGTTCTGTTCCTGTCCAGCGGGGAAATGGGCCTTGAGCAAAAGCTCAAAGAAGGCGGTCACAGGCACATGGCCGGGCA
AGGGGTGCGCATGGTGGGCATCCGGGCCGATGTGGGCAAGGGGCATAAGCTCTTTGACGAACTGCACGGCTATCCGGACG
GCAAAACACTGGCCGATGCCCTCAAGCTGGCGGTGTCGCAGTATTACGGTACGCCCTTGCGCGGCTTCTTGGAGCACTTC
ACCGCCAACATAGCCGAAAACACCAAGGCGGCCCGCGCTGTGCTGGAAGCTTTTGAACAGAGGGTATGCCCGCCGGAAGC
GGATGGGCAGGTGAAACGGGTCTGCCGTCTGTTCGCGCTGTTGACAGCCGGGGGTGAATTGGCAATCCGGTTCGGTGTGC
TCCCCTTGGCTCCACAATCCGCATGGGAAGCCAATGCCCGTTGTTTTCAGGATTGGATCACTCTGCGCGGCGGGCTTGAA
GCCGCTGAGGCAAGGGATGCGGCGTGCAGATTGCGGGCCTTCATTTCCGCCAACAGAATGTCGCGCACCGCCCATGCTGC
GCAAAACCGTGCGCTTTTATACCATTAA

Upstream 100 bases:

>100_bases
GAGTACAGCGGGCGTTCCATCGCAAGGGAACGTTATGAGTAGCGCAAACAAAACCCCGGTAACGCTGGCGGGCGTTGCCG
GGGCCACAGGAAAACAAAAA

Downstream 100 bases:

>100_bases
GGGCGATATTCTTGACTTTGATGGCTGACGTGTAAGTCTGTAATTCTGTAATGGCGTGGAAAAACAGACAGATAGCATTG
TACGCCATAAAGAAAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: Superfamily II Helicase; Prophage Primase; Inner Membrane; Primase C 2 Family; Bifunctional DNA Primase/Polymerase; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Zinc Finger CHC2-Family Protein; Inner Membrane Protein Phage Origin; Pathogenicity Island Protein; DNA Primase TraC

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSESKLPQNSRAGNQQTEADMPPEAPQPLPWPSSFRIGTDGVYICEDAGNGTYSYNYVFSPLHILARTCDGQGKNWGLLV
KVQAPNGQWHELVIPVSMLAGSTTVFRELLMSLGLRIASANYKYLLAYLSGANPQQIVRSVDRVGWHGGCFLLPEKCYPS
QSEAQQGGKFALLCSEGVNPFQCRGTLHQWQEHIGRYLAGNSRLILGVCAAFAAPLLKPCGVEGAGIGFEGDSSAGKTTA
LQVAGSVCGGGGQNGYIHRWRLTDNALESLAVMHNDNLLILDELGQSDARTAAESVYMLANGQGKARAQKDGSARVITEW
RVLFLSSGEMGLEQKLKEGGHRHMAGQGVRMVGIRADVGKGHKLFDELHGYPDGKTLADALKLAVSQYYGTPLRGFLEHF
TANIAENTKAARAVLEAFEQRVCPPEADGQVKRVCRLFALLTAGGELAIRFGVLPLAPQSAWEANARCFQDWITLRGGLE
AAEARDAACRLRAFISANRMSRTAHAAQNRALLYH

Sequences:

>Translated_515_residues
MSESKLPQNSRAGNQQTEADMPPEAPQPLPWPSSFRIGTDGVYICEDAGNGTYSYNYVFSPLHILARTCDGQGKNWGLLV
KVQAPNGQWHELVIPVSMLAGSTTVFRELLMSLGLRIASANYKYLLAYLSGANPQQIVRSVDRVGWHGGCFLLPEKCYPS
QSEAQQGGKFALLCSEGVNPFQCRGTLHQWQEHIGRYLAGNSRLILGVCAAFAAPLLKPCGVEGAGIGFEGDSSAGKTTA
LQVAGSVCGGGGQNGYIHRWRLTDNALESLAVMHNDNLLILDELGQSDARTAAESVYMLANGQGKARAQKDGSARVITEW
RVLFLSSGEMGLEQKLKEGGHRHMAGQGVRMVGIRADVGKGHKLFDELHGYPDGKTLADALKLAVSQYYGTPLRGFLEHF
TANIAENTKAARAVLEAFEQRVCPPEADGQVKRVCRLFALLTAGGELAIRFGVLPLAPQSAWEANARCFQDWITLRGGLE
AAEARDAACRLRAFISANRMSRTAHAAQNRALLYH
>Mature_514_residues
SESKLPQNSRAGNQQTEADMPPEAPQPLPWPSSFRIGTDGVYICEDAGNGTYSYNYVFSPLHILARTCDGQGKNWGLLVK
VQAPNGQWHELVIPVSMLAGSTTVFRELLMSLGLRIASANYKYLLAYLSGANPQQIVRSVDRVGWHGGCFLLPEKCYPSQ
SEAQQGGKFALLCSEGVNPFQCRGTLHQWQEHIGRYLAGNSRLILGVCAAFAAPLLKPCGVEGAGIGFEGDSSAGKTTAL
QVAGSVCGGGGQNGYIHRWRLTDNALESLAVMHNDNLLILDELGQSDARTAAESVYMLANGQGKARAQKDGSARVITEWR
VLFLSSGEMGLEQKLKEGGHRHMAGQGVRMVGIRADVGKGHKLFDELHGYPDGKTLADALKLAVSQYYGTPLRGFLEHFT
ANIAENTKAARAVLEAFEQRVCPPEADGQVKRVCRLFALLTAGGELAIRFGVLPLAPQSAWEANARCFQDWITLRGGLEA
AEARDAACRLRAFISANRMSRTAHAAQNRALLYH

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55771; Mature: 55640

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESKLPQNSRAGNQQTEADMPPEAPQPLPWPSSFRIGTDGVYICEDAGNGTYSYNYVFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEEEEHH
PLHILARTCDGQGKNWGLLVKVQAPNGQWHELVIPVSMLAGSTTVFRELLMSLGLRIASA
HHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCEEECC
NYKYLLAYLSGANPQQIVRSVDRVGWHGGCFLLPEKCYPSQSEAQQGGKFALLCSEGVNP
CCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECCCCCC
FQCRGTLHQWQEHIGRYLAGNSRLILGVCAAFAAPLLKPCGVEGAGIGFEGDSSAGKTTA
EECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEH
LQVAGSVCGGGGQNGYIHRWRLTDNALESLAVMHNDNLLILDELGQSDARTAAESVYMLA
EEEHHHHCCCCCCCCCEEEEEECHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHEEEEE
NGQGKARAQKDGSARVITEWRVLFLSSGEMGLEQKLKEGGHRHMAGQGVRMVGIRADVGK
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCC
GHKLFDELHGYPDGKTLADALKLAVSQYYGTPLRGFLEHFTANIAENTKAARAVLEAFEQ
CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVCPPEADGQVKRVCRLFALLTAGGELAIRFGVLPLAPQSAWEANARCFQDWITLRGGLE
HCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHCCCC
AAEARDAACRLRAFISANRMSRTAHAAQNRALLYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure 
SESKLPQNSRAGNQQTEADMPPEAPQPLPWPSSFRIGTDGVYICEDAGNGTYSYNYVFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEEEEHH
PLHILARTCDGQGKNWGLLVKVQAPNGQWHELVIPVSMLAGSTTVFRELLMSLGLRIASA
HHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCEEECC
NYKYLLAYLSGANPQQIVRSVDRVGWHGGCFLLPEKCYPSQSEAQQGGKFALLCSEGVNP
CCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECCCCCC
FQCRGTLHQWQEHIGRYLAGNSRLILGVCAAFAAPLLKPCGVEGAGIGFEGDSSAGKTTA
EECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEH
LQVAGSVCGGGGQNGYIHRWRLTDNALESLAVMHNDNLLILDELGQSDARTAAESVYMLA
EEEHHHHCCCCCCCCCEEEEEECHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHEEEEE
NGQGKARAQKDGSARVITEWRVLFLSSGEMGLEQKLKEGGHRHMAGQGVRMVGIRADVGK
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCC
GHKLFDELHGYPDGKTLADALKLAVSQYYGTPLRGFLEHFTANIAENTKAARAVLEAFEQ
CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVCPPEADGQVKRVCRLFALLTAGGELAIRFGVLPLAPQSAWEANARCFQDWITLRGGLE
HCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHCCCC
AAEARDAACRLRAFISANRMSRTAHAAQNRALLYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA