| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904483
Identifier: 220904483
GI number: 220904483
Start: 1426847
End: 1427374
Strand: Direct
Name: 220904483
Synonym: Ddes_1213
Alternate gene names: NA
Gene position: 1426847-1427374 (Clockwise)
Preceding gene: 220904482
Following gene: 220904484
Centisome position: 49.66
GC content: 53.41
Gene sequence:
>528_bases ATGAATATGCCCTATCTTGGAGAGTCTACTGATATTATTCTTGGTCAGGAATTTCTCACCTGGCTTTGGTACCAGAGCGA CACTGCCCCTGGCGCATTCACCGACAAGGAAGGCGCCCCTTTCTCTGTTTCTATGGAACAGCGGATAGTGGTACAAGGGG GCGAAGGAGACGCCCGGGAAACAGCCTCCGTTTCCGGTTCGCTTTCTCCCTTGCGGGAGGCACGCTTTGGACTCGGAACC GGCAAGAAGGTCAGCCGTGCGCTCATCCGGCTTGAAAAAGAAGAACTGGCGTTTCAGGTAACGCTCAAGGCAGAAGATTT TTGCCTTAACAGCCTGAAAACACCCAAGCTCGACAAAGGGGACAGTGACGACGATCCAGACGCCCTGCTGCTTGAAAAAT TTTACCTGATGGAAATATGCACCAATCTGCTGGACGCGCTGTACGCGCGCTTTCTTGCTCTGCGTCTTTCTCCACAGTGG CAGAAAGAAGTGGACGACATGCGCCAGTGGATGACCCGTACCGAGTAG
Upstream 100 bases:
>100_bases CCCTGGCGGCCTCCATGCTGGATGAAGAAAGCCTCATCCGCCTGGATCAGCTTGAGGCCACGCAGTTTGCCCCCCAGTCC TAGCCGTGGAGCCAACACAC
Downstream 100 bases:
>100_bases AGAGCCGCTCATGCCTCCCCTGCCCTCACATGCCCGCCGTCACGGTCGGCTGACCGCTATCGCTGCCAACGTCGCACGCA AGACGTTGTGGATGTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNMPYLGESTDIILGQEFLTWLWYQSDTAPGAFTDKEGAPFSVSMEQRIVVQGGEGDARETASVSGSLSPLREARFGLGT GKKVSRALIRLEKEELAFQVTLKAEDFCLNSLKTPKLDKGDSDDDPDALLLEKFYLMEICTNLLDALYARFLALRLSPQW QKEVDDMRQWMTRTE
Sequences:
>Translated_175_residues MNMPYLGESTDIILGQEFLTWLWYQSDTAPGAFTDKEGAPFSVSMEQRIVVQGGEGDARETASVSGSLSPLREARFGLGT GKKVSRALIRLEKEELAFQVTLKAEDFCLNSLKTPKLDKGDSDDDPDALLLEKFYLMEICTNLLDALYARFLALRLSPQW QKEVDDMRQWMTRTE >Mature_175_residues MNMPYLGESTDIILGQEFLTWLWYQSDTAPGAFTDKEGAPFSVSMEQRIVVQGGEGDARETASVSGSLSPLREARFGLGT GKKVSRALIRLEKEELAFQVTLKAEDFCLNSLKTPKLDKGDSDDDPDALLLEKFYLMEICTNLLDALYARFLALRLSPQW QKEVDDMRQWMTRTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19767; Mature: 19767
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPYLGESTDIILGQEFLTWLWYQSDTAPGAFTDKEGAPFSVSMEQRIVVQGGEGDARE CCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCHH TASVSGSLSPLREARFGLGTGKKVSRALIRLEKEELAFQVTLKAEDFCLNSLKTPKLDKG HHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEECHHHHHHHCCCCCCCCCC DSDDDPDALLLEKFYLMEICTNLLDALYARFLALRLSPQWQKEVDDMRQWMTRTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNMPYLGESTDIILGQEFLTWLWYQSDTAPGAFTDKEGAPFSVSMEQRIVVQGGEGDARE CCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCHH TASVSGSLSPLREARFGLGTGKKVSRALIRLEKEELAFQVTLKAEDFCLNSLKTPKLDKG HHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEECHHHHHHHCCCCCCCCCC DSDDDPDALLLEKFYLMEICTNLLDALYARFLALRLSPQWQKEVDDMRQWMTRTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA