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The map label for this gene is pqiB [H]

Identifier: 220904329

GI number: 220904329

Start: 1236659

End: 1237627

Strand: Reverse

Name: pqiB [H]

Synonym: Ddes_1056

Alternate gene names: 220904329

Gene position: 1237627-1236659 (Counterclockwise)

Preceding gene: 220904330

Following gene: 220904328

Centisome position: 43.07

GC content: 58.2

Gene sequence:

>969_bases
ATGAACGCGCAAAAATACAGAACCACTGTGGGAGCCTTTGTGCTTGGCGGGCTATCCCTGCTGGCTCTGGGATTCATCGT
ACTGGGCGGCGGCCGTCTGTTCAGCAATGACATGCAGTATGTTCTCTACTTTGACGGCTCTGTGAGCGGCCTTTCCACGG
GAGCCCCCGTTGTGTTCCGCGGTGTTCCCATGGGCAGCGTCACCCGCATCAACCTTGTGGCCAACACAAAAGACTCCAAT
GTCACCATTCCCGTCTATATCCGTATAGACGAACAAAGCTTTGTGCGCGCCCGCGGCTCTGCGCCCATTTCGGAATCAGT
CCGGGAAGAAATCGTCCGCCGCATGGTGCAGCGGGGCCTTCGTGCCCGCCTGCAACTACAAAGCCTTATCACCGGACAAT
ACCGGATCGAGCTGGACTTCTTTCCCGGCACGCCCGCTGTTTTCCGTTCCGGCACACCCGATACGGAAATTCCCACCATC
CCCTCCCCCATTGACACGCTGCAAACCACCCTGGCGCAACTGCCGCTGGAATCCATGGCCCACGCACTTGAAGCCATCCT
GCAAAGCCTGGCCCATTCCCTGGCGGACGACAGCCTTGGACGCGGCCTCAAAGCGTTTACGCGCACGTTTGAAGAAGTTG
AAGACGTCCTCAAAAACAGTTCCATGCGGCAAAATGCCGAAAGCATCCTGAAAAAGCTCAACACCGCCGCAAGCACAGTT
GAAGGGCAAATGCCGGGAACCTTTGTTACCTTGCGAGCCGCGCTGGAGAGCATGAGCCTGGCAGCGGACCAGCTGCGTGT
AGTCACGGCCTCGGCCCAAAGCCTTGTGGGGCGTGACTCGCCCACCGTCAACGATGTCCGCCGCCTGATCAGGGAAAGCA
TTGAAACCCTGCGCACCATCCGCAACTTCACACAGATGCTTGAACGCAACCCCGAAGCCCTGCTTATGGGCAGACAAGGA
AAACGCTGA

Upstream 100 bases:

>100_bases
CCAGCGCAATGCTTTTTCTTACCAGGGGTGAGCGCAGTCACGCTGAAAAAGAGCAGACGGAAAAAAACGCTTCCGCTGCG
CCGGACAAGGAAACGAATAT

Downstream 100 bases:

>100_bases
TGCAACGTTACGCCCTGTACACCCTCATGGCCTTCGTCGTGCTGATGGCTGCCTGCAGCCGCAGTACGCCTACGAATTAC
TATCTTCTGGAAAGCCGCCT

Product: Mammalian cell entry related domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNAQKYRTTVGAFVLGGLSLLALGFIVLGGGRLFSNDMQYVLYFDGSVSGLSTGAPVVFRGVPMGSVTRINLVANTKDSN
VTIPVYIRIDEQSFVRARGSAPISESVREEIVRRMVQRGLRARLQLQSLITGQYRIELDFFPGTPAVFRSGTPDTEIPTI
PSPIDTLQTTLAQLPLESMAHALEAILQSLAHSLADDSLGRGLKAFTRTFEEVEDVLKNSSMRQNAESILKKLNTAASTV
EGQMPGTFVTLRAALESMSLAADQLRVVTASAQSLVGRDSPTVNDVRRLIRESIETLRTIRNFTQMLERNPEALLMGRQG
KR

Sequences:

>Translated_322_residues
MNAQKYRTTVGAFVLGGLSLLALGFIVLGGGRLFSNDMQYVLYFDGSVSGLSTGAPVVFRGVPMGSVTRINLVANTKDSN
VTIPVYIRIDEQSFVRARGSAPISESVREEIVRRMVQRGLRARLQLQSLITGQYRIELDFFPGTPAVFRSGTPDTEIPTI
PSPIDTLQTTLAQLPLESMAHALEAILQSLAHSLADDSLGRGLKAFTRTFEEVEDVLKNSSMRQNAESILKKLNTAASTV
EGQMPGTFVTLRAALESMSLAADQLRVVTASAQSLVGRDSPTVNDVRRLIRESIETLRTIRNFTQMLERNPEALLMGRQG
KR
>Mature_322_residues
MNAQKYRTTVGAFVLGGLSLLALGFIVLGGGRLFSNDMQYVLYFDGSVSGLSTGAPVVFRGVPMGSVTRINLVANTKDSN
VTIPVYIRIDEQSFVRARGSAPISESVREEIVRRMVQRGLRARLQLQSLITGQYRIELDFFPGTPAVFRSGTPDTEIPTI
PSPIDTLQTTLAQLPLESMAHALEAILQSLAHSLADDSLGRGLKAFTRTFEEVEDVLKNSSMRQNAESILKKLNTAASTV
EGQMPGTFVTLRAALESMSLAADQLRVVTASAQSLVGRDSPTVNDVRRLIRESIETLRTIRNFTQMLERNPEALLMGRQG
KR

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiB family [H]

Homologues:

Organism=Escherichia coli, GI1787184, Length=232, Percent_Identity=30.1724137931034, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 35230; Mature: 35230

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQKYRTTVGAFVLGGLSLLALGFIVLGGGRLFSNDMQYVLYFDGSVSGLSTGAPVVFR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCEEEE
GVPMGSVTRINLVANTKDSNVTIPVYIRIDEQSFVRARGSAPISESVREEIVRRMVQRGL
CCCCCCCEEEEEEEECCCCCEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RARLQLQSLITGQYRIELDFFPGTPAVFRSGTPDTEIPTIPSPIDTLQTTLAQLPLESMA
HHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
HALEAILQSLAHSLADDSLGRGLKAFTRTFEEVEDVLKNSSMRQNAESILKKLNTAASTV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EGQMPGTFVTLRAALESMSLAADQLRVVTASAQSLVGRDSPTVNDVRRLIRESIETLRTI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RNFTQMLERNPEALLMGRQGKR
HHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MNAQKYRTTVGAFVLGGLSLLALGFIVLGGGRLFSNDMQYVLYFDGSVSGLSTGAPVVFR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCEEEE
GVPMGSVTRINLVANTKDSNVTIPVYIRIDEQSFVRARGSAPISESVREEIVRRMVQRGL
CCCCCCCEEEEEEEECCCCCEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RARLQLQSLITGQYRIELDFFPGTPAVFRSGTPDTEIPTIPSPIDTLQTTLAQLPLESMA
HHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
HALEAILQSLAHSLADDSLGRGLKAFTRTFEEVEDVLKNSSMRQNAESILKKLNTAASTV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EGQMPGTFVTLRAALESMSLAADQLRVVTASAQSLVGRDSPTVNDVRRLIRESIETLRTI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RNFTQMLERNPEALLMGRQGKR
HHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7751275 [H]