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The map label for this gene is hoxM [H]

Identifier: 220904310

GI number: 220904310

Start: 1213288

End: 1213773

Strand: Reverse

Name: hoxM [H]

Synonym: Ddes_1037

Alternate gene names: 220904310

Gene position: 1213773-1213288 (Counterclockwise)

Preceding gene: 220904311

Following gene: 220904305

Centisome position: 42.24

GC content: 52.26

Gene sequence:

>486_bases
ATGAGCAAAGAAAAAGTGCTTATCCTGGGTGTGGGCAATATTCTGCTGACCGATGAAGGCTTTGGGGTGCGGGCGGTGGA
ATACCTTGAGGCACAGTACCGTTGGCCTGAAAATGTGACTCTTATGGATGGCGGCACTCAAGGGCTGATGCTCATGAGCA
TACTTATGGATTGTGATTTTCTGGTGGTTCTGGACGTGGTATTGGGCCGCGAAGCGCCCGGATCCATATACTTGCTGGAA
GGGGAAAAACTGCGGCAAAGCCTGAGCTTCAGAGATTCAATGCACCAGACCGATCTTGTAGACACGCTTGTAACCTGCGA
ACTGGCCGGTCACCGGCCACGAGCGCTTGTTTTCGGCATGCAGCCATATGACTACAAAACCATGCAGGTCGGGTTGACTT
CAGAGGCAGAAGCCAGGTTGCCGGAGTTTTGCGCAAAAGTGGTGGCCGAGCTTGTTCATCACGACATTTGCGCCGAAAAA
ATCTGA

Upstream 100 bases:

>100_bases
CATGACTACAAGGTTCTGTAGTCTGCCGTAGCCGGAATAGATGAGGGCGGGGGAATTTGCCCCCGCCCTTTTTTTCACCT
TCAAGAAAGCGAGCAGGCAC

Downstream 100 bases:

>100_bases
CCCCTGGGCGTAGTTATACCGTTGAGGCATATCTCGAAGCTGTCACAGTGCTCACTACGGCGCCTGACAACGCAATTACT
CAGCGAAGTCGTCTGCACCT

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSKEKVLILGVGNILLTDEGFGVRAVEYLEAQYRWPENVTLMDGGTQGLMLMSILMDCDFLVVLDVVLGREAPGSIYLLE
GEKLRQSLSFRDSMHQTDLVDTLVTCELAGHRPRALVFGMQPYDYKTMQVGLTSEAEARLPEFCAKVVAELVHHDICAEK
I

Sequences:

>Translated_161_residues
MSKEKVLILGVGNILLTDEGFGVRAVEYLEAQYRWPENVTLMDGGTQGLMLMSILMDCDFLVVLDVVLGREAPGSIYLLE
GEKLRQSLSFRDSMHQTDLVDTLVTCELAGHRPRALVFGMQPYDYKTMQVGLTSEAEARLPEFCAKVVAELVHHDICAEK
I
>Mature_160_residues
SKEKVLILGVGNILLTDEGFGVRAVEYLEAQYRWPENVTLMDGGTQGLMLMSILMDCDFLVVLDVVLGREAPGSIYLLEG
EKLRQSLSFRDSMHQTDLVDTLVTCELAGHRPRALVFGMQPYDYKTMQVGLTSEAEARLPEFCAKVVAELVHHDICAEKI

Specific function: Not known. Could be involved in the processing of hydrogenase [H]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

Organism=Escherichia coli, GI1787209, Length=143, Percent_Identity=37.0629370629371, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI1789367, Length=149, Percent_Identity=36.9127516778523, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004419
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 17965; Mature: 17834

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEKVLILGVGNILLTDEGFGVRAVEYLEAQYRWPENVTLMDGGTQGLMLMSILMDCDF
CCCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCH
LVVLDVVLGREAPGSIYLLEGEKLRQSLSFRDSMHQTDLVDTLVTCELAGHRPRALVFGM
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
QPYDYKTMQVGLTSEAEARLPEFCAKVVAELVHHDICAEKI
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKEKVLILGVGNILLTDEGFGVRAVEYLEAQYRWPENVTLMDGGTQGLMLMSILMDCDF
CCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCH
LVVLDVVLGREAPGSIYLLEGEKLRQSLSFRDSMHQTDLVDTLVTCELAGHRPRALVFGM
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
QPYDYKTMQVGLTSEAEARLPEFCAKVVAELVHHDICAEKI
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Ni [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624446 [H]