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The map label for this gene is fliC [C]

Identifier: 220904301

GI number: 220904301

Start: 1203007

End: 1203915

Strand: Reverse

Name: fliC [C]

Synonym: Ddes_1028

Alternate gene names: 220904301

Gene position: 1203915-1203007 (Counterclockwise)

Preceding gene: 220904302

Following gene: 220904299

Centisome position: 41.9

GC content: 57.54

Gene sequence:

>909_bases
ATGTCTTTGGTTATTAACCACAACCTGATGGCCGCAAACACGGCCAGAAATTTGAATGCTCACTATTCACAACTGAGCAA
GTCGGTACAGCGCCTTTCTACAGGCCTGCGCGTCAACAGCGCGGCGGACGACGCCGCCGGCCTGGCAATCCGCGAACTGC
AGAGGGCCGACATCGCGACCCTGCAACAGGGCGCACGCAACGCCAACGACGCCATATCCATGATTCAGACCGCTGACGGT
GCTCTGGGTGTTATTGACGAAAAGCTCACCCGCATGAAAGAGCTGGCGGAACAGGCCGCTACCGGCACGTATGATTCCAC
CCAGCGCCTCATGATCGAGTCCGAATATCAGGCTATGGCTTCGGAAATCACCCGTATAGCCAATGCCACGGACTTTAACG
GCATTCACCTGCTCAACGGTTCCCTGTCCAGCGACACGCACGACGGCAGTGGTATGACGTCTACAGGCAAGCTCAAGGTC
CACTTCGGCACAGGCAACGACTCCGCCGAAGACTATTACTACATCAAAATCGGCAACAGCACTGCCTCTGCCCTCGGCGT
AGGCAATCAGGCCATTGACGATGCGACGGGCCAACTGCGTGACGGCGGAACAGTTTCTACCCAGCAGGCCGCGCAGCGCG
CCCTGGACGCCATCACCAACGCCATTGTTTCCAAAGACAAGATACGCGCTCACCTGGGCGCCATGCAAAACCGCCTGGAA
AACACCATTACCAACCTGAATATTCAGGCGGAAAATCTGCAGGCAGCCGAATCGCGCATTTCCGACGTAGACGTAGCCAC
GGAAATGACGCAGTTTGTGCGCAACCAGATTCTGAGCCAGTCTGCGGTAGCCATGCTCTCGCAGGCCAACTCGCTGCCCC
AGATGGCCATGCAGCTTATCGGCGGCTAG

Upstream 100 bases:

>100_bases
CACAATTAATTCATAACATACTTTAATTATAATATAATTTTTTTTGGCACATGGATTGCAAGGCCGGGGATACAGCTTAG
TAACCACCAGGAGGTGTCCC

Downstream 100 bases:

>100_bases
GCCATCTTATAATAGGCTGTGGCAGACCAAAGATGGGAGGTCCGGGGGCCGTGCCCCCGGACCAGACAAGACTGCGTCAT
TCCCGCGCCATACAGCCACT

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: Class B [H]

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSLVINHNLMAANTARNLNAHYSQLSKSVQRLSTGLRVNSAADDAAGLAIRELQRADIATLQQGARNANDAISMIQTADG
ALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGSLSSDTHDGSGMTSTGKLKV
HFGTGNDSAEDYYYIKIGNSTASALGVGNQAIDDATGQLRDGGTVSTQQAAQRALDAITNAIVSKDKIRAHLGAMQNRLE
NTITNLNIQAENLQAAESRISDVDVATEMTQFVRNQILSQSAVAMLSQANSLPQMAMQLIGG

Sequences:

>Translated_302_residues
MSLVINHNLMAANTARNLNAHYSQLSKSVQRLSTGLRVNSAADDAAGLAIRELQRADIATLQQGARNANDAISMIQTADG
ALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGSLSSDTHDGSGMTSTGKLKV
HFGTGNDSAEDYYYIKIGNSTASALGVGNQAIDDATGQLRDGGTVSTQQAAQRALDAITNAIVSKDKIRAHLGAMQNRLE
NTITNLNIQAENLQAAESRISDVDVATEMTQFVRNQILSQSAVAMLSQANSLPQMAMQLIGG
>Mature_301_residues
SLVINHNLMAANTARNLNAHYSQLSKSVQRLSTGLRVNSAADDAAGLAIRELQRADIATLQQGARNANDAISMIQTADGA
LGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGSLSSDTHDGSGMTSTGKLKVH
FGTGNDSAEDYYYIKIGNSTASALGVGNQAIDDATGQLRDGGTVSTQQAAQRALDAITNAIVSKDKIRAHLGAMQNRLEN
TITNLNIQAENLQAAESRISDVDVATEMTQFVRNQILSQSAVAMLSQANSLPQMAMQLIGG

Specific function: Component of the core of the flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=144, Percent_Identity=46.5277777777778, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 32130; Mature: 31999

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVINHNLMAANTARNLNAHYSQLSKSVQRLSTGLRVNSAADDAAGLAIRELQRADIAT
CEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LQQGARNANDAISMIQTADGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMA
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SEITRIANATDFNGIHLLNGSLSSDTHDGSGMTSTGKLKVHFGTGNDSAEDYYYIKIGNS
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCC
TASALGVGNQAIDDATGQLRDGGTVSTQQAAQRALDAITNAIVSKDKIRAHLGAMQNRLE
CHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTITNLNIQAENLQAAESRISDVDVATEMTQFVRNQILSQSAVAMLSQANSLPQMAMQLI
HHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GG
CC
>Mature Secondary Structure 
SLVINHNLMAANTARNLNAHYSQLSKSVQRLSTGLRVNSAADDAAGLAIRELQRADIAT
EEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LQQGARNANDAISMIQTADGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMA
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SEITRIANATDFNGIHLLNGSLSSDTHDGSGMTSTGKLKVHFGTGNDSAEDYYYIKIGNS
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCC
TASALGVGNQAIDDATGQLRDGGTVSTQQAAQRALDAITNAIVSKDKIRAHLGAMQNRLE
CHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTITNLNIQAENLQAAESRISDVDVATEMTQFVRNQILSQSAVAMLSQANSLPQMAMQLI
HHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3045083 [H]