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The map label for this gene is yybT [H]

Identifier: 218906662

GI number: 218906662

Start: 5285912

End: 5287885

Strand: Reverse

Name: yybT [H]

Synonym: BCAH820_5580

Alternate gene names: 218906662

Gene position: 5287885-5285912 (Counterclockwise)

Preceding gene: 218906663

Following gene: 218906661

Centisome position: 99.72

GC content: 35.82

Gene sequence:

>1974_bases
ATGCCTGAATTTTATAAGAAACAGTGGTTTTTATATCCTGTTTATGTATTGGCATTTTTTGTGTTTGTGCTCATTTCAAT
CCTCTGCTACTTTCATTTAATGATGGGGATAATCTCCTTTTTTATTTTTTGTATCGTCCTTTTTGTTGTTGTACGATTTG
AACTTACTTTCCAAAAGAATTTTGAAAAACATACGACAGATATGATTACAAGGGTAAAGAAAGTGAGTAATGAAGCATTT
AACCAGATGCCGATTGGTATTTTGTTATACAATAAGGATTATGGGATTGATTGGGCAAATCCTTATTTATCTTCATGTCT
GGGACAGCATGCATTAGCTGGATGGCACCTTTATGATGTATCAGAAACATTACTTCTTTTTATTAAGGGAGAAACTTCCG
ATGATATAGTTTCTTTAAATAATCGAAAGTTCCGTGTCTTTGTAAGGAAAGAAGAAAAGTTAATTTATTTCTTTGATGTA
ACAGAACAAACAGAAATCGAAAAAATGTACGAAGATCAACGTACTGTTTTAGCTGTAATTTATTTAGATAATTATGATGA
AGTTACACAAGGATTAGATGATCAATTACGTACGAATATAACAAGTCTTGTGACATCGCGTCTAAATGAATGGGCCGTTA
AGTATGGGGCGTATTTAAAACGTGCATCTTCGGAAAGATTCTTCGTTGTACTAAATGAAAGTATTTTAGCACAGATGGAG
AAAGGGAAATTTAGTATTTTAGATCAAGTACGTGAAGAAACATCCAAAAGGAATATACCACTTACATTAAGTGTAGGTGT
TGGATCAGGTGATTTACCTTTATCCGAGCTTGGAGCTATGGCTCAATCAGGTTTAGACCTTGCGCTTGGACGTGGTGGAG
ATCAAGTAGCTATTAAACAAGCGACAGGTAAAGTTAAGTTTTATGGTGGTAAGACAAATCCAGTGGAAAAACGTACTCGT
GTACGTGCCAGAGTGATTTCACATGCATTAAAGGATTTAGTACTAGAAAGTAGCAATGTCATTATAATGGGGCATAGGGC
TCCTGATATGGACGCAATTGGTGCTGCGATTGGTATTTTAAAAGTGGCGCAATTAAATGAACGAAAAGGATATATTGTGC
TCGATGAAAATGATTCTGATAAGGGAATTAAGCGTTTAATGGATAAAGTGAAACAAAATGAAGAGTTATGGTCTCACTTT
ATTACACCAGAACAAGCGATGGAATTTGCAAATGATGATTCATTACTTGTTGTTGTTGATACGCATAAGCCTTCAATGGT
GATGGAAGAAAAACTGTTACGCAAAATTGAAAATGTAGTTGTTATTGACCATCATCGCCGAGGAGAAGATTTTATTGAAG
ATCCATTGCTTGTTTACATGGAGCCATACGCTTCTTCCACGGCGGAACTTGTTACGGAATTACTTGAATACCAACCGAAA
AATTTAAAAATGACAATGTTAGAAGCGACAGCATTATTAGCAGGTATTATTGTTGATACGAAAAGCTTTACATTCCGGAC
AGGTGCTCGTACGTTTGATGCTGCTTCTTATTTACGCTCACACGGTGCAGATACTGTACTTGTACAAGAGCTTTTAAAAG
AAGATATGGATCAGTATTTACGGGTTGCAAAAGCCATTAAAAATGCGTACATTTATACAAATGGAATTGCGATTGCAAAA
GTTGATAGCGATGATTACTACGATCAAGTGCTTATTGCGCAATCAGCGGACACATTATTAACAATGACAGGAATTATTGC
ATCATTTGTTATTGCAAAACGTGGCGAGAATTTCATTGGAATTAGCGGCAGGTCTTTAGGTGAAGTGAATGTGCAGCTAA
TTATGGAAAATTTAGGTGGTGGTGGGCATTTAACAAATGCAGCCACACAAATGAAAAATGTTACAGTAGATGAAGCTGAG
GAGAAGCTTCGATTTGTTATTGATGACTATTTACAGGGAGGCACACAATCATGA

Upstream 100 bases:

>100_bases
ACGTTCTAAAATAGGAGGATAAAGTAATATTCCTTATACTATTTTAATCTGTTTAACTAACTGGAAGATAAGTTAGTTTT
ACTTTATAGGAGTTGTATAC

Downstream 100 bases:

>100_bases
AAGTAATTTTTCTAAAAGACGTAAAAGGTAAAGGGAAAAAAGGAGAAGTAAAAAACGTACCAGATGGTTATGCAAATAAC
TTCTTACTAAAACAAGGATT

Product: DHH subfamily 1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MPEFYKKQWFLYPVYVLAFFVFVLISILCYFHLMMGIISFFIFCIVLFVVVRFELTFQKNFEKHTTDMITRVKKVSNEAF
NQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLFIKGETSDDIVSLNNRKFRVFVRKEEKLIYFFDV
TEQTEIEKMYEDQRTVLAVIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERFFVVLNESILAQME
KGKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKFYGGKTNPVEKRTR
VRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNERKGYIVLDENDSDKGIKRLMDKVKQNEELWSHF
ITPEQAMEFANDDSLLVVVDTHKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASSTAELVTELLEYQPK
NLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIKNAYIYTNGIAIAK
VDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNAATQMKNVTVDEAE
EKLRFVIDDYLQGGTQS

Sequences:

>Translated_657_residues
MPEFYKKQWFLYPVYVLAFFVFVLISILCYFHLMMGIISFFIFCIVLFVVVRFELTFQKNFEKHTTDMITRVKKVSNEAF
NQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLFIKGETSDDIVSLNNRKFRVFVRKEEKLIYFFDV
TEQTEIEKMYEDQRTVLAVIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERFFVVLNESILAQME
KGKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKFYGGKTNPVEKRTR
VRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNERKGYIVLDENDSDKGIKRLMDKVKQNEELWSHF
ITPEQAMEFANDDSLLVVVDTHKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASSTAELVTELLEYQPK
NLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIKNAYIYTNGIAIAK
VDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNAATQMKNVTVDEAE
EKLRFVIDDYLQGGTQS
>Mature_656_residues
PEFYKKQWFLYPVYVLAFFVFVLISILCYFHLMMGIISFFIFCIVLFVVVRFELTFQKNFEKHTTDMITRVKKVSNEAFN
QMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLFIKGETSDDIVSLNNRKFRVFVRKEEKLIYFFDVT
EQTEIEKMYEDQRTVLAVIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERFFVVLNESILAQMEK
GKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKFYGGKTNPVEKRTRV
RARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNERKGYIVLDENDSDKGIKRLMDKVKQNEELWSHFI
TPEQAMEFANDDSLLVVVDTHKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASSTAELVTELLEYQPKN
LKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIKNAYIYTNGIAIAKV
DSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNAATQMKNVTVDEAEE
KLRFVIDDYLQGGTQS

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 74293; Mature: 74161

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFYKKQWFLYPVYVLAFFVFVLISILCYFHLMMGIISFFIFCIVLFVVVRFELTFQKN
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FEKHTTDMITRVKKVSNEAFNQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDV
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEC
SETLLLFIKGETSDDIVSLNNRKFRVFVRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAVI
CCEEEEEEECCCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEE
YLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERFFVVLNESILAQME
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
KGKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQ
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEE
ATGKVKFYGGKTNPVEKRTRVRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGIL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
KVAQLNERKGYIVLDENDSDKGIKRLMDKVKQNEELWSHFITPEQAMEFANDDSLLVVVD
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCEEEEEE
THKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASSTAELVTELLEYQPK
CCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCCC
NLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYL
CCEEHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RVAKAIKNAYIYTNGIAIAKVDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIG
HHHHHHHCCEEEECCEEEEEECCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
ISGRSLGEVNVQLIMENLGGGGHLTNAATQMKNVTVDEAEEKLRFVIDDYLQGGTQS
ECCCCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PEFYKKQWFLYPVYVLAFFVFVLISILCYFHLMMGIISFFIFCIVLFVVVRFELTFQKN
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FEKHTTDMITRVKKVSNEAFNQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDV
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEC
SETLLLFIKGETSDDIVSLNNRKFRVFVRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAVI
CCEEEEEEECCCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEE
YLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERFFVVLNESILAQME
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
KGKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQ
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEE
ATGKVKFYGGKTNPVEKRTRVRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGIL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
KVAQLNERKGYIVLDENDSDKGIKRLMDKVKQNEELWSHFITPEQAMEFANDDSLLVVVD
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCEEEEEE
THKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASSTAELVTELLEYQPK
CCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCCC
NLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYL
CCEEHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RVAKAIKNAYIYTNGIAIAKVDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIG
HHHHHHHCCEEEECCEEEEEECCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
ISGRSLGEVNVQLIMENLGGGGHLTNAATQMKNVTVDEAEEKLRFVIDDYLQGGTQS
ECCCCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]