Click here to switch to the map view.

The map label for this gene is ypjH [H]

Identifier: 218906602

GI number: 218906602

Start: 5218150

End: 5219250

Strand: Reverse

Name: ypjH [H]

Synonym: BCAH820_5516

Alternate gene names: 218906602

Gene position: 5219250-5218150 (Counterclockwise)

Preceding gene: 218906603

Following gene: 218906601

Centisome position: 98.43

GC content: 34.24

Gene sequence:

>1101_bases
ATGAAAGTGTTGCATATGAATGCTGGTGCGGAAGAAGGTGGGGGGAAAACACATATTATTTCACTTTTATCTCAATTTTC
AAAGGAAGAAGTGGAATTAATGGTATTTGAAGAAGGTGCGATTGCTAGAGAGGCGAGAAACCTTGGTATTCAAGTACATG
TTTTTACCCAATCATCTCGGTACGACCTATCAATTCTTTCAAAAATAAAAGCATTTATTAATGAAAATCAATTTGACATT
GTGCATACACATGGCGCACGAGCAAATTTCTATCTCTCCCTCTTGAAAAAAGGTATAAAAGCGAAATGGATAATGACTGT
CCACAGTGATCCAACTTTGGATTTTATGAAGAGGGGATTAAAAGGATGGGTATTTACGAAGTTAAATTTACGTTCTTTCA
GGAAGGTAGATTTATTCTTTGCAATTACGGAGAACTTTAAGAGAAATATAATAAAACTAGGTGTACCAGAAGAGAAGATT
TGTACTGTTTATAATGGAATTGAGTATGATAGTAATCCGGCAAAACCTTATGATAAGAGTGAATTTGGCATCGATGAAGG
AATGTTTACAGCCATTCAAGTAGCACGTCTTCATCCTGTTAAAGGTCATGATATTTTATTTGAAGCATTACAAAAAATTA
AAATTCCCAATATAAAGGTACTCTTGCTTGGTGATGGTCCTATAGAAGCAGAATTAAAAGAGATGGTGAAACAAAAGGGT
CTAGAGGATAAAGTAATGTTTCTAGGTTTTCGTACAGATTCAAAGGAATTATATGCGTCTGCACACATTAATTTGTTAAC
CTCTTATAGCGAAAGTTTCCCTCTCGTTTTATTAGAAGCGGCTAATCAACGCTTAACATCTATTGCAACAAATGTAGGTG
ATATGAAAAAGTTAATAGTTGATGATACGTATGGATGGATTGTACCGATTGGTGATGCAGACTTGTTAGCAAATGCATTA
GAAAATGCTTATGAAAAATGGTTGAATGGTGAATTAGAAGCGATGGGAAATCGTTTATATACTCACGCATCTACTCACTT
CTCGCTAAAGAATTTGTATGAAGATACTTATAATGCATATAAAACACTTTTACTGAAATAG

Upstream 100 bases:

>100_bases
AGTTGACCTGGAAATTGAATGATAGAAAAATAAAAGCTAGCATATGTTAGCTTTTATTTTGTTATAGTAAATAAAAAGAA
AAAAATGGGGGATGTAAGAA

Downstream 100 bases:

>100_bases
AGAGGATAGTTAATCATGCAAGTAAAAACGGTTGATATTCTAGGTGTTCCTTTTTCTACAATGACAATGGATGAAACAAT
CCAATATTTGAAGGGACAAC

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSRYDLSILSKIKAFINENQFDI
VHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGLKGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKI
CTVYNGIEYDSNPAKPYDKSEFGIDEGMFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG
LEDKVMFLGFRTDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIVDDTYGWIVPIGDADLLANAL
ENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAYKTLLLK

Sequences:

>Translated_366_residues
MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSRYDLSILSKIKAFINENQFDI
VHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGLKGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKI
CTVYNGIEYDSNPAKPYDKSEFGIDEGMFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG
LEDKVMFLGFRTDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIVDDTYGWIVPIGDADLLANAL
ENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAYKTLLLK
>Mature_366_residues
MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSRYDLSILSKIKAFINENQFDI
VHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGLKGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKI
CTVYNGIEYDSNPAKPYDKSEFGIDEGMFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG
LEDKVMFLGFRTDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIVDDTYGWIVPIGDADLLANAL
ENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAYKTLLLK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=190, Percent_Identity=28.4210526315789, Blast_Score=75, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI9755344, Length=249, Percent_Identity=24.0963855421687, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41443; Mature: 41443

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSR
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCEEEEEEECCCC
YDLSILSKIKAFINENQFDIVHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGL
CCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCC
KGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKICTVYNGIEYDSNPAKPYDKS
CCEEEEEECCCCCCEEEEEEEEHHHHHCCEEEECCCHHHHHHEECCCCCCCCCCCCCCCC
EFGIDEGMFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCC
LEDKVMFLGFRTDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIV
CCCEEEEEEEECCCHHHHHHHHEEEEECCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHEE
DDTYGWIVPIGDADLLANALENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAY
ECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHH
KTLLLK
HHHHCC
>Mature Secondary Structure
MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSR
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCEEEEEEECCCC
YDLSILSKIKAFINENQFDIVHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGL
CCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCC
KGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKICTVYNGIEYDSNPAKPYDKS
CCEEEEEECCCCCCEEEEEEEEHHHHHCCEEEECCCHHHHHHEECCCCCCCCCCCCCCCC
EFGIDEGMFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCC
LEDKVMFLGFRTDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIV
CCCEEEEEEEECCCHHHHHHHHEEEEECCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHEE
DDTYGWIVPIGDADLLANALENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAY
ECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHH
KTLLLK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]