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The map label for this gene is ypoP [H]

Identifier: 218905220

GI number: 218905220

Start: 3922817

End: 3923236

Strand: Reverse

Name: ypoP [H]

Synonym: BCAH820_4103

Alternate gene names: 218905220

Gene position: 3923236-3922817 (Counterclockwise)

Preceding gene: 218905224

Following gene: 218905218

Centisome position: 73.99

GC content: 35.95

Gene sequence:

>420_bases
GTGAACGAAAAAAGAGAAACATTGATTTTAGAGTTATCCGGATCATTTCGGAAGATGATACGTTTATTACAAAATGATAT
TAATACACGTTTTGCAGAACATATGCCATATAATGAATTTTCTGTATTACGCGCGTTATTTTTAAACAGTCCACAGATGG
CTTCGCAAATTGCGAGTGAAGTAAACGTAACCTCCAGTCATATTACAGCTGTTACTGATCGTCTCGTACGAAAAGGGTTT
GTAGAAAGAAAGCGTTCAAATTCAGACCGTCGTATCGTGTACTTAGAAATTACAGAACACGGAAGAGAAGTAACTGAAAA
ACTTGAAGCTGTGCGTAAAGAATATTATAAAGAGAGATTTAAAGGTTGGAGCGACCAAGAAATAGAAATGGTGTTAGAGC
TATTTGGCCGCGTATTATAA

Upstream 100 bases:

>100_bases
AAAGTTACATAAATGAGAATGTTGAGGGAAGAAAGCATATACAACATAGGTATTTATAGATTATAATATGTGTAAATATG
ATAAAAAAGGGACGAGGCTA

Downstream 100 bases:

>100_bases
TAAATGAGGATAGGAAGCAAAAGCTTTCCTATCCTTTTTCTTTTGAATAAAAACATTTTGAAACTCCAATACTTTAATTA
AAAAGAATCGGAGTGAAAAA

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASEVNVTSSHITAVTDRLVRKGF
VERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERFKGWSDQEIEMVLELFGRVL

Sequences:

>Translated_139_residues
MNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASEVNVTSSHITAVTDRLVRKGF
VERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERFKGWSDQEIEMVLELFGRVL
>Mature_139_residues
MNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASEVNVTSSHITAVTDRLVRKGF
VERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERFKGWSDQEIEMVLELFGRVL

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16441; Mature: 16441

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASE
CCCCHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH
VNVTSSHITAVTDRLVRKGFVERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERF
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KGWSDQEIEMVLELFGRVL
CCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASE
CCCCHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH
VNVTSSHITAVTDRLVRKGFVERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERF
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KGWSDQEIEMVLELFGRVL
CCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]