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The map label for this gene is ylxR [H]

Identifier: 218904943

GI number: 218904943

Start: 3662065

End: 3662337

Strand: Reverse

Name: ylxR [H]

Synonym: BCAH820_3827

Alternate gene names: 218904943

Gene position: 3662337-3662065 (Counterclockwise)

Preceding gene: 218904944

Following gene: 218904942

Centisome position: 69.07

GC content: 36.63

Gene sequence:

>273_bases
ATGAGCAATCGAAAAGTTCCGTTACGAAAATGTGTTGCAACGCAAGAAATGAAATCAAAACGAGAGCTCGTTCGCATTGT
TCGTTCCAAAGAGGGAGAAGTGTCTATTGATTTAACTGGAAAGAAATCAGGACGAGGTGCTTATTTATCAAAAGATAAAG
AAAGCATTCTTCAAGCTCAAAAGAAAAATGTTTTGGAACATCATCTAAAAGCGAAAATCGACAGTTCTCTTTATGAAGAG
CTTCTTGAGCTTGTTGAGAAGGAGTCGAAATAA

Upstream 100 bases:

>100_bases
AGTCTGATGCGAAACAACTTGGTATTGTAACAGAAGAAGATAGCGTAGTCGCATTCGGATTCGATTCAGTTGAAGACGAA
ATCGAATAGAGGTGATGAGT

Downstream 100 bases:

>100_bases
GTGTCCGATTGGAAATCGTTTTTAGGACTAGCAAACCGGGCTCGAAAAATTATTTCGGGTGAAGAACTCGTTTTAAAGGA
AGTACGAAGTGGCAAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSNRKVPLRKCVATQEMKSKRELVRIVRSKEGEVSIDLTGKKSGRGAYLSKDKESILQAQKKNVLEHHLKAKIDSSLYEE
LLELVEKESK

Sequences:

>Translated_90_residues
MSNRKVPLRKCVATQEMKSKRELVRIVRSKEGEVSIDLTGKKSGRGAYLSKDKESILQAQKKNVLEHHLKAKIDSSLYEE
LLELVEKESK
>Mature_89_residues
SNRKVPLRKCVATQEMKSKRELVRIVRSKEGEVSIDLTGKKSGRGAYLSKDKESILQAQKKNVLEHHLKAKIDSSLYEEL
LELVEKESK

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 10296; Mature: 10165

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRKVPLRKCVATQEMKSKRELVRIVRSKEGEVSIDLTGKKSGRGAYLSKDKESILQAQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
KKNVLEHHLKAKIDSSLYEELLELVEKESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNRKVPLRKCVATQEMKSKRELVRIVRSKEGEVSIDLTGKKSGRGAYLSKDKESILQAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
KKNVLEHHLKAKIDSSLYEELLELVEKESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]