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The map label for this gene is 218902107

Identifier: 218902107

GI number: 218902107

Start: 956453

End: 957448

Strand: Direct

Name: 218902107

Synonym: BCAH820_0989

Alternate gene names: NA

Gene position: 956453-957448 (Clockwise)

Preceding gene: 218902105

Following gene: 218902108

Centisome position: 18.04

GC content: 40.8

Gene sequence:

>996_bases
ATGAARGTTAGTAAAGTGTACACGACAATTGATGCGCACGTAGCTGGAGAGCCACTTCGAATTATTACAGGAGGCGTGCC
GGAAATAAAAGGAGATACGCAGCTAGAAAGACGCGCGTACTGTATGGAACATTTGGATCATCTTCGCGAAGTTCTTATGT
ATGAACCGAGAGGACATCACGGGATGTACGGTTGTATCATTACTCCGCCTGCGAGTGCTCACGCTGATTTTGGTGTATTA
TTTATGCACAACGAAGGATGGAGTACGATGTGTGGTCACGGCATTATCGCTGTTATTACAGTCGGAATTGAAACGGGTAT
GTTTGAAACAAAACAAAAGTTTATTATTGATAGCCCTGCTGGGGAAGTCATTGCGTACGCAAAATATAACGGGAGCGAAG
TAGAGTCCGTATCATTTGAAAATGTTCCTTCATTTGTATACAAAAAAGACGTTTCTATTAAAATAGATAACTATGAATTT
CAAGTAGATATCGCGTTTGGTGGAGCATTTTATGCGGTAGTAGATAGTAAAGAATTTGGCTTGAAAGTTGATTTCAAAGA
CTTATCTGCTATTCAACAGTGGGGCGGTAAAATTAAACATTATATCGAGAGTAAAATGGAAGTAAAGCACCCGCTTGAAG
AAGGTTTAAAAGGAATATACGGCGTTATTTTTTCAGATGAGCCGAAAGAGACAAACGCAACTTTACGAAATGTAACGATC
TTCGCTGACGGGCAAGTAGATCGTTCTCCTTGCGGCACAGGAACTTCCGCGAGAATCGCAACCCTTTTTGAAAAAGGTAT
TTTACAAAAGGGAGAAATATTCATCCACGAATGCATTACTGACGGGAAATTTGAGGGGGAAGTATTGTCGGTAACAGCGG
TACATACATATGAAGCTGTCGTTCCGAAAGTAACAGGGAATGCATTTATTACAGGATTTCATCAGTTCGTTGTAGACCCG
CGAGATGATTTGAATCGGGGATTTTTGTTAGGATAG

Upstream 100 bases:

>100_bases
AATGTAAGCTTTTTTAAACAATGTATACAAATTTATACCCTATGCGTTGGCATGATATTTGCAATAAAAATAGTATCAAC
TATATAGGGGAGAGATAGAA

Downstream 100 bases:

>100_bases
AAGGAGGAGGTGGAAAGATATGCTAGTCATAAGCGCGAACGAACAAAGAAACTTAGTAAATATGAACGAAGTCATTACAT
ACGCGGCGCTTGCTTTACAA

Product: putative proline racemase

Products: D-proline

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGDTQLERRAYCMEHLDHLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPAGEVIAYAKYNGSEVESVSFENVPSFVYKKDVSIKIDNYEF
QVDIAFGGAFYAVVDSKEFGLKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKETNATLRNVTI
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGKFEGEVLSVTAVHTYEAVVPKVTGNAFITGFHQFVVDP
RDDLNRGFLLG

Sequences:

>Translated_331_residues
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGDTQLERRAYCMEHLDHLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPAGEVIAYAKYNGSEVESVSFENVPSFVYKKDVSIKIDNYEF
QVDIAFGGAFYAVVDSKEFGLKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKETNATLRNVTI
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGKFEGEVLSVTAVHTYEAVVPKVTGNAFITGFHQFVVDP
RDDLNRGFLLG
>Mature_331_residues
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGDTQLERRAYCMEHLDHLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPAGEVIAYAKYNGSEVESVSFENVPSFVYKKDVSIKIDNYEF
QVDIAFGGAFYAVVDSKEFGLKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKETNATLRNVTI
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGKFEGEVLSVTAVHTYEAVVPKVTGNAFITGFHQFVVDP
RDDLNRGFLLG

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=337, Percent_Identity=35.9050445103858, Blast_Score=229, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: 5.1.1.4

Molecular weight: Translated: 36597; Mature: 36597

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGDTQLERRAYCMEHLDHLREVLMYEPRGHH
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC
GMYGCIITPPASAHADFGVLFMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPA
CEEEEEECCCCCCCCCEEEEEEECCCCCCHHCCCEEEEEEEECCCCCCCCCCEEEEECCC
GEVIAYAKYNGSEVESVSFENVPSFVYKKDVSIKIDNYEFQVDIAFGGAFYAVVDSKEFG
CCEEEEEECCCCCEEEECCCCCCCEEEECCCEEEEECEEEEEEEEECCEEEEEEECCCCC
LKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKETNATLRNVTI
EEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCCCCCEEEEEEE
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGKFEGEVLSVTAVHTYEAV
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHC
VPKVTGNAFITGFHQFVVDPRDDLNRGFLLG
CCCCCCCEEEEEEEHEEECCHHHCCCCCCCC
>Mature Secondary Structure
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGDTQLERRAYCMEHLDHLREVLMYEPRGHH
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC
GMYGCIITPPASAHADFGVLFMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPA
CEEEEEECCCCCCCCCEEEEEEECCCCCCHHCCCEEEEEEEECCCCCCCCCCEEEEECCC
GEVIAYAKYNGSEVESVSFENVPSFVYKKDVSIKIDNYEFQVDIAFGGAFYAVVDSKEFG
CCEEEEEECCCCCEEEECCCCCCCEEEECCCEEEEECEEEEEEEEECCEEEEEEECCCCC
LKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKETNATLRNVTI
EEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCCCCCEEEEEEE
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGKFEGEVLSVTAVHTYEAV
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHC
VPKVTGNAFITGFHQFVVDPRDDLNRGFLLG
CCCCCCCEEEEEEEHEEECCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-proline

Specific reaction: L-proline = D-proline

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]