| Definition | Bacillus cereus AH820, complete genome. |
|---|---|
| Accession | NC_011773 |
| Length | 5,302,683 |
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The map label for this gene is licR [H]
Identifier: 218902001
GI number: 218902001
Start: 845646
End: 847586
Strand: Direct
Name: licR [H]
Synonym: BCAH820_0883
Alternate gene names: 218902001
Gene position: 845646-847586 (Clockwise)
Preceding gene: 218902000
Following gene: 218902002
Centisome position: 15.95
GC content: 33.13
Gene sequence:
>1941_bases ATGACAAAGGTGCATCAGCGATTAATTTCTATTTTAGAGGAGTTTTTAGAAGAGAAATCGATGTTAAATCGAGCTTTTTT AGCGAGCCGTTTACATGTATCAACGAAGACGATTCAAAAAGATATAAAATTATTAAATGATATATTGGAAGAAAACGGAG CGAAAATTGAATCGCAAAGAGGGACTGGATACGAGCTAGAAATTATACAAACGAAGAAGTTTGAAGAGTTTTGTGTGAGT CTATTTCAAAAACAGACGGAAAAAATCCCAACTTCTTATGAAGAAAGGATAGCGTACATTCTGCAACGTATTTTAACCAC CGAGGGATATGTGAAGCTTTCACAGTTAGCAGAGGAGATTTATGTAAGTAAATCGACTGTAAATTTAATTATGAAAGATG TTACAGATATATGTGGGCGCTATCAATTACAAATTGAAAAGAGACCGTATTATGGTATACGTATTGTGGGAGAGGAGTTT CATATTCGTTCTTGTTTATCACAATATGGTTTACCGCGTTATGACCATACTCCGTTTCATGAGCAATTTGAGCAGAGTGA TACATATGTATCGTTACCTCATATACCGCTTATCCGTTCGGTTATATTAAAGTATATCGAGGGAGGGACGATATATTTAT CAGATATAGAAATTGATAATTTAGTCATTCATATTGCAATTGCATTAAAGCGTTGTGAAGATCAGCATTATATGAAAGGA CTAAATGAGGAACAAGCTGAACTTATAATAAAGAAAGAATATGCAATTGCGAAACAGATTGTAGGGGATTTAGAGAAAGA GTTGCATCTTTCATTTCCAGAAGAAGAAGTTTTATATGTGACAATGCATTTATTAAGTACTGCTGTCACATCGAAAGATC GTTATGAAAATGTGGAAGAACTATTAGGGAAAGATTTATATGCATTCATGCAACATATTCTTTTTAAAGTAGCGGAAGAA CGGAATCTTGTTTTTTATTATGATGAAGAATTATTATTTGGATTTGGTGTTCATTTAAAAACGTTATTAAACCGTTTGAA GTATAAGTTAAATACGAGAAACCCTCTTTTGGCAGAAGTGAAAAAGAATTATCCGTATGCTTTTGAAATTGCGGTTCTCG TTGGGGATATAATTGGTGAATATACAGGTGAGTCGATTCCGGAAAGTGAAATTGGTTATATTGCCATTCACTTCGGCGGA GCAATGAGCCGTTTACAGGAACAAAATCAAAAGAAGAGATGTTTATTAGTTTGTGCGACTGGTCAAGGAAGCGCCCAGCT ATTGAAATATAAAATTTTATCACAGTTCCGAGATAAATTAGAAATTGTAGGGATTACAGGTTACTATCAATTGAAAGTGG AAGATCTGTATAAAGAAAAGATAGATTGTATTATTAGTACGATTCATATACCAAGTGGTTTACCTGTACCTATTATAAAA GTAAACTCAATATTTGATGATAAAGAGATTAAGTCAATTGGTCAGCAGTTGTTTACGCATGTGAATAATAGTGTACAGCA ATATATGAAGGAAGATTTAATCTTTTTAAATCATAGTGCTTCTACGAAGGAAGAGGTTATCCAATTTTTATGTGAGAAAG CTGCTGAGAAAAACTATGTGCCAGAACACTTTTATGACTCTGTTATGGAAAGAGAGAATACATCTCCTACAGCGGTTGGA AATTTAGTTGCAATTCCACATCCGATGCAGTTATTAAGTGCGGAAACATTTTTGATGTTTTGTACACTTGAAAAAGCTGT TGATTGGGGAGATAAGAAAGTACAAGTTATTATTTTATTTAGTGTAAAGCGCAATAATAATGAGGATTTACAACGTCTTT ATGATTTTTTATATGATATTATGTCTAGTCAAAGTACGATAGAGAAATTAACGCATGCTGAAGGTATTGAAGATTTCCAA GAGGTATTACTATCTATATAA
Upstream 100 bases:
>100_bases TAAATTCGGATTTACATTAAAGAGATAGATAAAATAAAAGGGAAAAACTACTGACTTCAGCAGCTTTTTCCTTTTTATAT ATATAGTGAGAGGAAGAGCT
Downstream 100 bases:
>100_bases GAAAAGTATGTAAAAACTTCCGTTACACAACGGAAGTTTTTTATGTTTAATTGTATGCGTTTTCATAATAAGATAAAAGC ATAGAAAAAAGATAGCTTGG
Product: transcription antiterminator, BglG family
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYELEIIQTKKFEEFCVS LFQKQTEKIPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEF HIRSCLSQYGLPRYDHTPFHEQFEQSDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKG LNEEQAELIIKKEYAIAKQIVGDLEKELHLSFPEEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILFKVAEE RNLVFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGG AMSRLQEQNQKKRCLLVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLPVPIIK VNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKAAEKNYVPEHFYDSVMERENTSPTAVG NLVAIPHPMQLLSAETFLMFCTLEKAVDWGDKKVQVIILFSVKRNNNEDLQRLYDFLYDIMSSQSTIEKLTHAEGIEDFQ EVLLSI
Sequences:
>Translated_646_residues MTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYELEIIQTKKFEEFCVS LFQKQTEKIPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEF HIRSCLSQYGLPRYDHTPFHEQFEQSDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKG LNEEQAELIIKKEYAIAKQIVGDLEKELHLSFPEEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILFKVAEE RNLVFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGG AMSRLQEQNQKKRCLLVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLPVPIIK VNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKAAEKNYVPEHFYDSVMERENTSPTAVG NLVAIPHPMQLLSAETFLMFCTLEKAVDWGDKKVQVIILFSVKRNNNEDLQRLYDFLYDIMSSQSTIEKLTHAEGIEDFQ EVLLSI >Mature_645_residues TKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYELEIIQTKKFEEFCVSL FQKQTEKIPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEFH IRSCLSQYGLPRYDHTPFHEQFEQSDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGL NEEQAELIIKKEYAIAKQIVGDLEKELHLSFPEEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILFKVAEER NLVFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGA MSRLQEQNQKKRCLLVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLPVPIIKV NSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKAAEKNYVPEHFYDSVMERENTSPTAVGN LVAIPHPMQLLSAETFLMFCTLEKAVDWGDKKVQVIILFSVKRNNNEDLQRLYDFLYDIMSSQSTIEKLTHAEGIEDFQE VLLSI
Specific function: Positive regulator of the licABCH operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790027, Length=136, Percent_Identity=28.6764705882353, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 74699; Mature: 74568
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GTGYELEIIQTKKFEEFCVSLFQKQTEKIPTSYEERIAYILQRILTTEGYVKLSQLAEEI CCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH YVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEFHIRSCLSQYGLPRYDHTPFH HHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCH EQFEQSDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKG HHHHCCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHCC LNEEQAELIIKKEYAIAKQIVGDLEKELHLSFPEEEVLYVTMHLLSTAVTSKDRYENVEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH LLGKDLYAFMQHILFKVAEERNLVFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEV HHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCLLVCAT HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEEEEEC GQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLPVPIIK CCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCEEE VNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKAAEKNYV ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHCCCCC PEHFYDSVMERENTSPTAVGNLVAIPHPMQLLSAETFLMFCTLEKAVDWGDKKVQVIILF CHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHEEHHHHHCCCCCEEEEEEEE SVKRNNNEDLQRLYDFLYDIMSSQSTIEKLTHAEGIEDFQEVLLSI EECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure TKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GTGYELEIIQTKKFEEFCVSLFQKQTEKIPTSYEERIAYILQRILTTEGYVKLSQLAEEI CCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH YVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEFHIRSCLSQYGLPRYDHTPFH HHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCH EQFEQSDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKG HHHHCCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHCC LNEEQAELIIKKEYAIAKQIVGDLEKELHLSFPEEEVLYVTMHLLSTAVTSKDRYENVEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH LLGKDLYAFMQHILFKVAEERNLVFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEV HHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCLLVCAT HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEEEEEC GQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLPVPIIK CCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCEEE VNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKAAEKNYV ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHCCCCC PEHFYDSVMERENTSPTAVGNLVAIPHPMQLLSAETFLMFCTLEKAVDWGDKKVQVIILF CHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHEEHHHHHCCCCCEEEEEEEE SVKRNNNEDLQRLYDFLYDIMSSQSTIEKLTHAEGIEDFQEVLLSI EECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377; 10438772 [H]